Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq58 104 3e-17
seq47 98.7 1e-15
>seq58
Length=350062
Score = 104 bits (114), Expect = 3e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | |||||| || | ||| |||||| || || ||||| |||| || || || |
Sbjct 20974 ACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCC 20915
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || ||||| ||||||||||| || | ||||||||||| | || | | |||||
Sbjct 20914 ATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTT 20855
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
||| |||| || ||||| | | | | ||||| | || || || |||| || ||
Sbjct 20854 GTCGCTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAAT 20795
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189
|| || ||||| | |||||||| || || |||||||| ||
Sbjct 20794 AGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATTTTCAC 20753
>seq47
Length=387992
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025
||||| | |||||||||| ||| |||||| || || || || || | ||||| ||
Sbjct 346204 AAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGG 346263
Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085
|||| || |||||||| |||||||| || || ||||||||||| | || | | |||
Sbjct 346264 CCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCC 346323
Query 43086 TTGTCCATGATTTT--TTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCG 43143
||||| |||| || | | ||| ||| | || || | || ||||| || | |
Sbjct 346324 TTGTCGCTGATCTTGCTCTTCACAGCTTCG--ATGGTATCATTAGACTCCACTTCAAGAG 346381
Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACG 43190
|||| || || || || | ||||| | |||||| ||||| || |||
Sbjct 346382 TGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTTAACG 346428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816806603080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |