Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq58 104 3e-17 seq47 98.7 1e-15 >seq58 Length=350062 Score = 104 bits (114), Expect = 3e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | ||| |||||| || || ||||| |||| || || || | Sbjct 20974 ACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCC 20915 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||| ||||||||||| || | ||||||||||| | || | | ||||| Sbjct 20914 ATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTT 20855 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| |||| || ||||| | | | | ||||| | || || || |||| || || Sbjct 20854 GTCGCTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAAT 20795 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189 || || ||||| | |||||||| || || |||||||| || Sbjct 20794 AGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATTTTCAC 20753 >seq47 Length=387992 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 ||||| | |||||||||| ||| |||||| || || || || || | ||||| || Sbjct 346204 AAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGG 346263 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 |||| || |||||||| |||||||| || || ||||||||||| | || | | ||| Sbjct 346264 CCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCC 346323 Query 43086 TTGTCCATGATTTT--TTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCG 43143 ||||| |||| || | | ||| ||| | || || | || ||||| || | | Sbjct 346324 TTGTCGCTGATCTTGCTCTTCACAGCTTCG--ATGGTATCATTAGACTCCACTTCAAGAG 346381 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACG 43190 |||| || || || || | ||||| | |||||| ||||| || ||| Sbjct 346382 TGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTTAACG 346428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816806603080