Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq28 116 3e-21 seq29 95.1 1e-14 seq58 89.7 5e-13 seq47 86.0 6e-12 >seq28 Length=170371 Score = 116 bits (128), Expect = 3e-21 Identities = 301/453 (66%), Gaps = 8/453 (2%) Strand=Plus/Minus Query 57678 TTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTG 57737 |||||| || || | |||||||| ||||| || |||||||| || ||||| ||| Sbjct 14455 TTTATTTCACGAGTTCTAGCGTTTTTTGCCGCTAGTGACGGTATTGTGAATGAGAACTTG 14396 Query 57738 GTCGAAAGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTC 57795 || || || || | || || | | ||||| | |||||||||||||| | Sbjct 14395 GTTTCCAGGTT--CAGTACTGACGTTGGTATCTCTGAGGCCAAGTGCTTTTACGGATTCC 14338 Query 57796 AAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGA 57855 | | || || ||| | || || || ||||| || || || || || ||||| | Sbjct 14337 AGATTATGATGGAGAACATTCACTCTGAGATGTACAGTCTTCTTATTGACACTTACGTCA 14278 Query 57856 AGGACAACGACGAGAAACGTAGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGC 57913 |||| ||| | | ||| | || || || | || || || || || || || Sbjct 14277 AGGA-AACTAAG-GAATCCCAGTTCCTTTTTGATGCCATTTTCACGATTCCTGCCATTCA 14220 Query 57914 CAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAG 57973 |||||||| ||||| | | ||||| | || || | ||||| ||| | Sbjct 14219 GAAGAAGGCCAAGTGGGCTCTTCGCTGGATTACTGACGAGGAAGCTAGTTTCGCTGAGCG 14160 Query 57974 GCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATT 58033 ||| | || ||||| || || || ||| | ||||| || || |||||| || || || Sbjct 14159 ACTAGTTGCATTCGCAGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTTTGCTGCTATTTT 14100 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 ||| | || ||||| ||||| ||||| || |||| || || ||||||||||| || || Sbjct 14099 CTGGCTCAAAAAACGTGGCCTTATGCCGGGTTTGACCTTCAGTAACGAGTTGATTTCTCG 14040 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 ||||||||||| ||||| ||||| || || || Sbjct 14039 TGACGAGGGTCTTCATACCGATTTCGCTTGTCT 14007 >seq29 Length=154453 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||| | |||||||| ||||| || || |||||| |||| |||||| | Sbjct 41872 AAAATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCC 41813 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 |||| | || | || ||| || | ||| || |||||||| | || || || Sbjct 41812 AATGACACCATTGAGGCCGT-AAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGA 41754 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||| || ||||| || ||||||||||||||| | ||||| || | || || Sbjct 41753 CCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTA 41694 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || ||||| || |||||||| |||| || Sbjct 41693 CAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCT 41658 >seq58 Length=350062 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||| ||||||| |||| || || || || ||| |||| ||||| | Sbjct 20756 AAAATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCT 20815 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAG--AGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 |||| |||| | |||||| || ||| |||| |||||||||| | || || | Sbjct 20816 AATGACACCATCGAGGCTGTCAAA-AGCAAGATCAGCG-ACAAGGAAGGTATTCCTCCTG 20873 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||||| | || |||||||| |||||| | || || Sbjct 20874 ACCAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGA 20913 >seq47 Length=387992 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| || || | ||||| |||| || || || ||||| | || || || | Sbjct 346424 AACATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCT 346365 Query 31250 TCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || | ||||| | || || | ||| |||| |||||||||| | || || || Sbjct 346364 AATGATACCATCGAAGCTGTGAAGAGCAAGATCAGCG-ACAAGGAAGGTATTCCTCCTGA 346306 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || ||||||||||| ||| | || ||| ||| | ||| || Sbjct 346305 CCAGCAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTA 346246 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || || || ||||| ||| |||| || Sbjct 346245 TAACATCCAGAAGGAGTCCACTCTGCATTTGGTTCT 346210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765781499120