Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq28 116 3e-21
seq29 95.1 1e-14
seq58 89.7 5e-13
seq47 86.0 6e-12
>seq28
Length=170371
Score = 116 bits (128), Expect = 3e-21
Identities = 301/453 (66%), Gaps = 8/453 (2%)
Strand=Plus/Minus
Query 57678 TTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTG 57737
|||||| || || | |||||||| ||||| || |||||||| || ||||| |||
Sbjct 14455 TTTATTTCACGAGTTCTAGCGTTTTTTGCCGCTAGTGACGGTATTGTGAATGAGAACTTG 14396
Query 57738 GTCGAAAGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTC 57795
|| || || || | || || | | ||||| | |||||||||||||| |
Sbjct 14395 GTTTCCAGGTT--CAGTACTGACGTTGGTATCTCTGAGGCCAAGTGCTTTTACGGATTCC 14338
Query 57796 AAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGA 57855
| | || || ||| | || || || ||||| || || || || || ||||| |
Sbjct 14337 AGATTATGATGGAGAACATTCACTCTGAGATGTACAGTCTTCTTATTGACACTTACGTCA 14278
Query 57856 AGGACAACGACGAGAAACGTAGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGC 57913
|||| ||| | | ||| | || || || | || || || || || || ||
Sbjct 14277 AGGA-AACTAAG-GAATCCCAGTTCCTTTTTGATGCCATTTTCACGATTCCTGCCATTCA 14220
Query 57914 CAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAG 57973
|||||||| ||||| | | ||||| | || || | ||||| ||| |
Sbjct 14219 GAAGAAGGCCAAGTGGGCTCTTCGCTGGATTACTGACGAGGAAGCTAGTTTCGCTGAGCG 14160
Query 57974 GCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATT 58033
||| | || ||||| || || || ||| | ||||| || || |||||| || || ||
Sbjct 14159 ACTAGTTGCATTCGCAGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTTTGCTGCTATTTT 14100
Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093
||| | || ||||| ||||| ||||| || |||| || || ||||||||||| || ||
Sbjct 14099 CTGGCTCAAAAAACGTGGCCTTATGCCGGGTTTGACCTTCAGTAACGAGTTGATTTCTCG 14040
Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
||||||||||| ||||| ||||| || || ||
Sbjct 14039 TGACGAGGGTCTTCATACCGATTTCGCTTGTCT 14007
>seq29
Length=154453
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||| | |||||||| ||||| || || |||||| |||| |||||| |
Sbjct 41872 AAAATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCC 41813
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|||| | || | || ||| || | ||| || |||||||| | || || ||
Sbjct 41812 AATGACACCATTGAGGCCGT-AAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGA 41754
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||| || ||||| || ||||||||||||||| | ||||| || | || ||
Sbjct 41753 CCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTA 41694
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || ||||| || |||||||| |||| ||
Sbjct 41693 CAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCT 41658
>seq58
Length=350062
Score = 89.7 bits (98), Expect = 5e-13
Identities = 118/160 (74%), Gaps = 4/160 (3%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||| ||||||| |||| || || || || ||| |||| ||||| |
Sbjct 20756 AAAATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCT 20815
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAG--AGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
|||| |||| | |||||| || ||| |||| |||||||||| | || || |
Sbjct 20816 AATGACACCATCGAGGCTGTCAAA-AGCAAGATCAGCG-ACAAGGAAGGTATTCCTCCTG 20873
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||||||||| | || |||||||| |||||| | || ||
Sbjct 20874 ACCAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGA 20913
>seq47
Length=387992
Score = 86.0 bits (94), Expect = 6e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|||||||| || || | ||||| |||| || || || ||||| | || || || |
Sbjct 346424 AACATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCT 346365
Query 31250 TCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|| | ||||| | || || | ||| |||| |||||||||| | || || ||
Sbjct 346364 AATGATACCATCGAAGCTGTGAAGAGCAAGATCAGCG-ACAAGGAAGGTATTCCTCCTGA 346306
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
|||||||||||| || ||||||||||| ||| | || ||| ||| | ||| ||
Sbjct 346305 CCAGCAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTA 346246
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||| || || || || ||||| ||| |||| ||
Sbjct 346245 TAACATCCAGAAGGAGTCCACTCTGCATTTGGTTCT 346210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765781499120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |