Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq17 336 3e-87 seq28 181 1e-40 >seq17 Length=239553 Score = 336 bits (372), Expect = 3e-87 Identities = 1383/2153 (64%), Gaps = 69/2153 (3%) Strand=Plus/Plus Query 62034 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62093 |||| ||| | ||||| ||||| | ||| | ||||| | || || ||||| ||||| Sbjct 96092 TCCTGGTCAACCGTGAACTGAATAGCAGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 96151 Query 62094 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 62152 || ||||| | ||| | ||| ||||| ||||||||||| || || ||| ||| | Sbjct 96152 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTGCCCATAGTT 96211 Query 62153 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62212 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 96212 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 96270 Query 62213 AGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 62272 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 96271 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 96330 Query 62273 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTACCATAATCCTATTC 62327 ||| | |||| || ||| || ||| || |||||| | | || | |||||| Sbjct 96331 ATCCTGAGGAATCGAGGGGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 96388 Query 62328 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACT 62387 || || ||||| ||||| | | || | | | || |||| || ||||| Sbjct 96389 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 96448 Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 | ||||||||| |||| ||| ||||| | || ||| | || ||| | || || | Sbjct 96449 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 96508 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | | | Sbjct 96509 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGA 96568 Query 62508 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCC 62567 ||| | | ||| || | ||| | |||| | | ||||| | ||| | || Sbjct 96569 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 96628 Query 62568 GACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGAT-----C 62622 | ||| ||| | || |||| | | | || || | | | Sbjct 96629 GTAGGTGTAAC-----GCCCCAAAGATCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 96683 Query 62623 CTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTT---TACAACTCGCCTCTAATG 62679 || | || || ||||| || || || || ||| | | || || || || | | Sbjct 96684 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAA---GCTTCAACAG 96740 Query 62680 CACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAA 62739 | | | ||| ||||| || || |||| |||| || ||||| || || || |||| Sbjct 96741 CTGCATGATATATGGTCTCGAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAA 96800 Query 62740 ATGGATAATTTAAG-AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62798 | || | | | || | || || || || || || || | |||||| | | | || ||| Sbjct 96801 AAGGC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGT 96859 Query 62799 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62858 ||||| | | | || || ||| ||||| | ||| || ||||| |||| |||||| Sbjct 96860 CTATGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATT 96919 Query 62859 TTATTGAGATTTCTGACAATTAC-TTTGACCACATCCTTCA---GTTTGAGAAAATCAA- 62913 | ||| | | || | | | || |||||| || || | || | |||| | || | Sbjct 96920 TGATTCA-AGTTATAAGTAATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAG 96978 Query 62914 ATCGCC--CATCTATT------ACAAA--CATGTTCAATGCAACAGATGCCAGATTACAC 62963 | | || |||| || ||||| || | | ||||| || ||||||||||| Sbjct 96979 AACACCATCATCCTTTGTCTTTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACAT 97036 Query 62964 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 63023 || || || | || | | || | | || ||| ||| | |||| || |||| Sbjct 97037 ACAGCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTG 97096 Query 63024 ATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 63083 ||||| || | ||| | ||||||||||| |||| | |||||||||||| ||||| Sbjct 97097 ATAGTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAA 97156 Query 63084 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 63142 ||| |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || Sbjct 97157 GGATTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCATA-GCTTCTGAGCTTTGAT 97215 Query 63143 TATA----GATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGT 63198 || || | || | | | | ||| || | || || | |||||| || | Sbjct 97216 GGTACGACGACCTTTACC--CATACG--TTCATAACGTGTGTAAAGCTCTTCGAATTCAT 97271 Query 63199 CTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63258 | || |||||| | | | ||| ||||| | ||||||||||| | ||||||||| | Sbjct 97272 CACCATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCAT 97331 Query 63259 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318 || ||| |||| ||||| || | ||||||||||||||||| | ||| ||||| | | Sbjct 97332 CAGACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGG 97391 Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378 | ||| || || || || ||||| |||||||| ||| | | || |||| || Sbjct 97392 CACGGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCAT 97451 Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438 |||| ||||| | || || || | | | || || |||||||| || |||||||| | | Sbjct 97452 GCCAGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACAT 97511 Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498 | | ||| |||||||| | || | | |||||||| ||||||||| ||| |||| || | Sbjct 97512 AACGAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAG 97571 Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63558 |||||| ||| || ||| ||||||| ||||| || ||||| || || || | Sbjct 97572 TACCGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAG 97631 Query 63559 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCAT 63618 | |||||| || | || || ||||| || ||||| ||||| || || || | Sbjct 97632 CAGATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGT 97691 Query 63619 CGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATA 63678 | ||||| || || ||||| | |||||| | | | ||| || ||||| | | Sbjct 97692 CTTTCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACA 97751 Query 63679 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCT 63737 | || ||||||||||| || || | || | || | | | ||| || || || | || Sbjct 97752 AAGTGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCT 97811 Query 63738 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63797 || || | | ||| || || | || || | ||| | ||| ||||| || | | Sbjct 97812 TAG-GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGT 97870 Query 63798 TC---AACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63854 || ||||| || | ||||| |||||| || | ||| ||||| ||||| Sbjct 97871 TCGTGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCG 97927 Query 63855 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATAT 63914 || || |||||| || || || | |||| || | | || || | | | || Sbjct 97928 AAGTAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGC 97987 Query 63915 TTGTTAACTATATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAG 63972 || || || | | ||| | | ||| ||||| || || || || | ||| | | Sbjct 97988 TTCTTGACGA-CTTCAT-GAACCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGG 98045 Query 63973 GATTAACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCCTTG 64031 | ||||||||| || ||| |||||| | || | ||| ||| || | ||| || | |||| Sbjct 98046 GGTTAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTG 98104 Query 64032 TGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTA 64091 || || || || || || || | || || |||| ||||| || |||||||| || || Sbjct 98105 TGAAGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTC 98164 Query 64092 CAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 64144 | | || || |||| ||||| || |||| | ||||| || || || || Sbjct 98165 ATACTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 98217 >seq28 Length=170371 Score = 181 bits (200), Expect = 1e-40 Identities = 491/746 (66%), Gaps = 19/746 (3%) Strand=Plus/Plus Query 33272 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 33331 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 13700 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 13759 Query 33332 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAttttttt 33391 || ||||||| ||||| ||||||||||| || ||||||| |||||||| | || || Sbjct 13760 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 13819 Query 33392 AAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTC 33451 ||||| | | || |||||| || || || || | ||| ||||| | || Sbjct 13820 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 13879 Query 33452 ACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGA 33511 |||||| || | || | || || | ||| | | | | || || ||||| Sbjct 13880 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 13939 Query 33512 TACCGCATTTGTTATAATAAATC---TAAC---GGTTTCTTCACTCGGTGGATGTAAT-- 33563 || || | || | |||| | |||| || | || ||| ||| | Sbjct 13940 GACTGCTTCAGTAAGAATACGTTCTATAACAAAGGGTGCT------GGTC--TGTTCTCC 13991 Query 33564 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623 ||||| | | | | ||| ||||||||| || ||||||||||| | | ||| || Sbjct 13992 AAATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAAC 14051 Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683 |||||| || || | || ||||| |||||||| ||||| ||||| || || | ||| Sbjct 14052 TCGTTACTGAAGGTCAAACCCGGCATAAGGCCACGTTTTTTGAGCCAGAAAATAGCAGCA 14111 Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33743 || ||||| || ||||| | || || || || || || |||| |||| ||| | || Sbjct 14112 AAGGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCAACTAGTCGCTCAGCGAAA 14171 Query 33744 CCGGC--GCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33800 | || || |||| ||||| ||||||| | ||||||||| | | ||| Sbjct 14172 CTAGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGA 14231 Query 33801 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33860 ||||| ||||||| ||| || | | ||| ||| | || || || ||||| || Sbjct 14232 ATCGTGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCA 14291 Query 33861 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33920 || | |||||| ||||| || || |||||||| || || ||||| |||||||| || Sbjct 14292 ATAAGAAGACTGTACATCTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAG 14351 Query 33921 CATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 33980 || | ||||| | || || || |||| || | | || || |||||||| Sbjct 14352 CACTTGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACA 14411 Query 33981 ATTCCATCACTGGCTGCAAAAAACGC 34006 || || ||||| || ||||||||||| Sbjct 14412 ATACCGTCACTAGCGGCAAAAAACGC 14437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816726128080