Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq17 345 6e-90 seq28 183 4e-41 >seq17 Length=239553 Score = 345 bits (382), Expect = 6e-90 Identities = 1382/2151 (64%), Gaps = 65/2151 (3%) Strand=Plus/Plus Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886 |||| ||| | ||||| ||||| | ||| | ||||| | || || ||||| ||||| Sbjct 96092 TCCTGGTCAACCGTGAACTGAATAGCAGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 96151 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 64945 || ||||| | ||| | ||| ||||| ||||||||||| || || ||| ||| | Sbjct 96152 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTGCCCATAGTT 96211 Query 64946 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 65005 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 96212 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 96270 Query 65006 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 65065 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 96271 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 96330 Query 65066 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTC 65120 ||| | |||| || ||| || ||| || |||||| ||| || | |||||| Sbjct 96331 ATCCTGAGGAATCGAGGGGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 96388 Query 65121 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 65180 || || ||||| ||||| | | || | | | || |||| |||||||| Sbjct 96389 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 96448 Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | | Sbjct 96449 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 96508 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | | | Sbjct 96509 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGA 96568 Query 65301 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 65360 ||| | | ||| || | ||| | |||| | || ||||| | ||| | || Sbjct 96569 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 96628 Query 65361 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT-----C 65415 | ||| ||| | |||| | | | || || | | | Sbjct 96629 GTAGGTGTAACGCCCCAAAGA-----TCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 96683 Query 65416 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 65475 || | || || || || || || || || ||| | || | || || | || Sbjct 96684 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTG 96743 Query 65476 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 65535 | | ||| ||||| ||||| |||| |||| || ||||| || || || ||||| | Sbjct 96744 CATGATATATGGTCTCGAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAG 96803 Query 65536 GATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 65594 | | | | || | || || || ||||| || || | |||||| | | | || |||||| Sbjct 96804 GC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTA 96862 Query 65595 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 65654 || | | | || || ||| ||||| | ||| || ||||| |||| ||||||| | Sbjct 96863 TGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGA 96922 Query 65655 TTGAGATTTCTGACAATTAC-TTTGACCACATCCTTCA---GTTTGA---------GAAA 65701 || | | || | | | || |||||| || || | || | |||| ||| Sbjct 96923 TTCA-AGTTATAAGTAATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAAC 96981 Query 65702 ATCAA-ATCGCTCATCTATTACAAA--CATGTTCAATGCAACAGATGCCAGATTACAAAC 65758 | || ||| | ||| ||||||| || | | ||||| || ||||||||||| || Sbjct 96982 ACCATCATCCTTTGTCT-TTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACATAC 97038 Query 65759 GGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGAT 65818 || || | || | | || | | || ||| ||| | |||| || |||||| Sbjct 97039 AGCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGAT 97098 Query 65819 GGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGG 65878 || || | ||| | ||||||||||| |||| | |||||||||||| ||||| || Sbjct 97099 AGTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGG 97158 Query 65879 AGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTA 65937 | |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || Sbjct 97159 ATTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCATA-GCTTCTGAGCTTTGATGG 97217 Query 65938 TAGATTTGTATCTCTTTTCTCTTTCGT--ATA--GTGTATACAATCGTTCGAACTCGTCT 65993 || | |||| | | | ||| ||| |||| || | |||||| || || Sbjct 97218 TAC----GACGACCTTTACCCATACGTTCATAACGTGTGTAAAGCTCTTCGAATTCATCA 97273 Query 65994 CCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCA 66053 || |||||| | | ||||| ||||| | ||||||||||| | ||||||||| ||| Sbjct 97274 CCATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCA 97333 Query 66054 TCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTT 66113 ||| |||| ||||| || | ||||||||||||||||| | ||| | ||| | || Sbjct 97334 GACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCA 97393 Query 66114 CTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGC 66173 | ||| || || || || ||||| |||||||| ||| | | || ||||| |||| Sbjct 97394 CGGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGC 97453 Query 66174 CACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTAT 66233 || ||||| | || || || | | | || || |||||||| || |||||||| | || Sbjct 97454 CAGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAA 97513 Query 66234 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTC 66293 | ||| |||||||| | || | | |||||||| |||||| ||||||||||| || || Sbjct 97514 CGAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTA 97573 Query 66294 CCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCC 66353 |||| ||| || ||| | ||||| ||||| || ||||| || || || || Sbjct 97574 CCGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCA 97633 Query 66354 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCC 66413 |||||| || | || || ||||| |||||||| ||||| || ||| || || Sbjct 97634 GATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCT 97693 Query 66414 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 66473 ||||| || || ||||| | |||||| | | ||| || ||||| | || Sbjct 97694 TTCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAA 97753 Query 66474 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCTGA 66532 || ||||||||||| || || | || | || | | | ||| || || || | || | Sbjct 97754 GTGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTA 97813 Query 66533 GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 66592 | || | | ||| || || | || || | ||| | ||| ||||| || | ||| Sbjct 97814 G-GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTC 97872 Query 66593 ---AACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649 ||| | || | ||||| |||||| || | ||| ||||| ||||| || Sbjct 97873 GTGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAA 97929 Query 66650 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 66709 || |||||| || || || | |||| || | | | || || | | || || Sbjct 97930 GTAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTT 97989 Query 66710 GTTAACTACATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGA 66767 || || || | ||| | | ||| ||||| || || || || | ||| | || Sbjct 97990 CTTGACGAC-TTCAT-GAACCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGG 98047 Query 66768 TTGACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCTTTGTG 66826 || |||||| || ||| |||||| | || | ||| ||| || | ||| || | ||||| Sbjct 98048 TTAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTG 98106 Query 66827 TAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACA 66886 || || || | || || | || || | || ||||| || |||||||| || || Sbjct 98107 AAGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCAT 98166 Query 66887 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 66937 | | || || |||| ||||| || |||| | ||||| || || || || Sbjct 98167 ACTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 98217 >seq28 Length=170371 Score = 183 bits (202), Expect = 4e-41 Identities = 489/744 (66%), Gaps = 15/744 (2%) Strand=Plus/Plus Query 35848 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 35907 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 13700 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 13759 Query 35908 ACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAttttttt 35967 ||| | ||||| ||||| |||||||||||||| |||||| ||||| || | || || Sbjct 13760 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 13819 Query 35968 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTC 36027 ||||| | | || |||||| || ||||| || | ||| ||||| | || Sbjct 13820 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 13879 Query 36028 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 36087 |||||| || | || | || || | ||| | | | | || || |||||| Sbjct 13880 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 13939 Query 36088 GACCGCGTCTGTTATAATAGAT---ATTACT---GTTTCTTCACTCGGTGGATACAATAA 36141 ||| || || || | |||| | || || | | || ||| | | || Sbjct 13940 GACTGCTTCAGTAAGAATACGTTCTATAACAAAGGGTGCT------GGTCTGTTCTCCAA 13993 Query 36142 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTC 36201 ||| | | | | ||| ||||||||| || ||||||||||| | | ||| || || Sbjct 13994 ATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTC 14053 Query 36202 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 36261 ||| || || | || ||||| |||||||| ||||| ||||| || || | ||||| Sbjct 14054 GTTACTGAAGGTCAAACCCGGCATAAGGCCACGTTTTTTGAGCCAGAAAATAGCAGCAAA 14113 Query 36262 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC 36321 ||||| || ||||||| || || || || || || |||| |||| ||| | ||| Sbjct 14114 GGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCAACTAGTCGCTCAGCGAAACT 14173 Query 36322 GGC--ACT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 36378 || || |||| ||||| ||||||| | ||||||||| | | ||| || Sbjct 14174 AGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAAT 14233 Query 36379 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 36438 || || |||| ||| || | | ||| ||| | || || || || || ||||| Sbjct 14234 CGTGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAAT 14293 Query 36439 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACA 36498 | |||||| ||||| || || |||||||| || || || || |||||||| || || Sbjct 14294 AAGAAGACTGTACATCTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCA 14353 Query 36499 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 36558 | ||||| | || || || |||| || | | || || |||||||| || Sbjct 14354 CTTGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAAT 14413 Query 36559 TCCGTCACTGGCTGCAAAAAACGC 36582 |||||||| || ||||||||||| Sbjct 14414 ACCGTCACTAGCGGCAAAAAACGC 14437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171886785240