Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq17 361 7e-95 seq28 183 4e-41 >seq17 Length=239553 Score = 361 bits (400), Expect = 7e-95 Identities = 1385/2154 (64%), Gaps = 71/2154 (3%) Strand=Plus/Plus Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848 |||| ||| | || |||||||| | || | |||||| | || || ||||| ||||| Sbjct 96092 TCCTGGTCAACCGTGAACTGAATAGCAGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 96151 Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCT 70907 || ||||| | ||| | ||| ||||| ||||||||||| || || ||| |||| | Sbjct 96152 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTGCCCATAGTT 96211 Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967 || | || |||| |||||||| |||||| || || ||||| | || | | || Sbjct 96212 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 96270 Query 70968 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 71027 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 96271 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 96330 Query 71028 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCAATAATCCTATTT 71082 ||| | |||| || ||| || ||| || |||||| |||||| | ||||| Sbjct 96331 ATCCTGAGGAATCGAGGGGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 96388 Query 71083 TTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACT 71142 || || || || ||||| | | || | | | || |||| |||||||| Sbjct 96389 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 96448 Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | Sbjct 96449 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 96508 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | ||| Sbjct 96509 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGA 96568 Query 71263 CTATTTCTAAGACCAT-------GTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCA 71315 ||| | | ||||| | |||||| |||| | || ||||| | ||| Sbjct 96569 GAATTACGCAAACCATACTTCTTGAGATCGG-------CTTTCAAAGTATCCCAGTCCCA 96621 Query 71316 AAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGA 71375 | || | ||| ||| || | || | | | | || Sbjct 96622 CAAGTCAGTAGGTGTAACGCCCCAAAGATCGTAGGAAAGC-TGACCTTCCGAA-GCAGGA 96679 Query 71376 T--CCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAAT 71433 ||| | || || || || || || || | || | || | || || | Sbjct 96680 CTGCCTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACA 96739 Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCA 71493 ||| ||| ||| ||||| ||||| |||| |||| || ||||| || || || ||| Sbjct 96740 GCTGCATGATATATGGTCTCGAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCA 96799 Query 71494 AATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGG 71552 || || | | | || | || || || ||||| || || | ||| || | | | || || Sbjct 96800 AAAGGC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGG 96858 Query 71553 TCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 71612 ||| || | | | || ||| ||| ||||| | ||| || ||||| |||| ||||| Sbjct 96859 TCTATGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAAT 96918 Query 71613 TTTATTGAGATTTCTGACTATTAC-TTTGACCACATCCTTTA---GTTTGAGAAAATCAA 71668 || ||| | | || | | || || |||||| || || | | | |||| | || | Sbjct 96919 TTGATTCA-AGTTATAAGTAATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGA 96977 Query 71669 -------ATC-TCCCATCTATT-ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAA 71719 ||| ||| | | || ||||| | | ||||| || ||||||||||| | Sbjct 96978 GAACACCATCATCCTTTGTCTTTACAAAGGCAGGGAGAGCAACTGAAGCCAGATTACATA 97037 Query 71720 CGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGA 71779 | || || | || | | || | | |||||| ||| | |||| || ||||| Sbjct 97038 CAGCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGA 97097 Query 71780 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACG 71839 | || || | ||| | ||||||||||| |||| | |||||||||||| || || | Sbjct 97098 TAGTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAG 97157 Query 71840 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATT 71898 || |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || Sbjct 97158 GATTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCATA-GCTTCTGAGCTTTGATG 97216 Query 71899 ATATTCTTGTATCTCTTTTCT--CTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTC 71956 || | | || | | | ||| || |||| || | |||||| || || | Sbjct 97217 GTA--CGACGACCTTTACCCATACGTTCATAACGTGTGTAAAGCTCTTCGAATTCATCAC 97274 Query 71957 CCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCAT 72016 | || ||| | | ||||| ||||| || ||||||||||||| ||||||||||||| Sbjct 97275 CATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAG 97334 Query 72017 CATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 72076 || |||| ||||| || | ||||||||||||||||| | ||| ||||| | || | Sbjct 97335 ACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCAC 97394 Query 72077 TATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 72136 || || || || || ||||| |||||||| ||| | | || |||| ||||| Sbjct 97395 GGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCC 97454 Query 72137 ACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATC 72196 | ||||| | || || || | | | || || |||||||| || |||||||| | || | Sbjct 97455 AGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAAC 97514 Query 72197 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCC 72256 ||| |||||||| | || | | |||||||| |||||| ||||||| ||| || || | Sbjct 97515 GAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTAC 97574 Query 72257 CGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCA 72316 ||| ||| || ||| ||||||| |||||| || ||||| || || || || Sbjct 97575 CGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAG 97634 Query 72317 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 72376 |||||| || | || || ||||| |||||||| ||||| || ||| || || Sbjct 97635 ATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTT 97694 Query 72377 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 72436 ||||| || || ||||| | |||||| | | ||| || ||||| | || | Sbjct 97695 TCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAG 97754 Query 72437 TAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT-AGCT--- 72492 | ||||||||||| || || | || | |||| | | ||| || || || | || Sbjct 97755 TGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAG 97814 Query 72493 -GATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCT 72551 ||| || | || ||| || || | || || | ||| | ||||||||| || | Sbjct 97815 GGATGTTAAAACC-----ATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACG 97869 Query 72552 TTC---AACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 72608 ||| ||| | ||| | ||||| |||||| || | ||| ||||| ||||| Sbjct 97870 TTCGTGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACC 97926 Query 72609 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATA 72668 || || |||||| || || || | |||| || | | || || || | | || Sbjct 97927 GAAGTAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATG 97986 Query 72669 TTTGTTAACTATATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTA 72726 || || || | | |||| | ||| ||||| || || || || | ||| | Sbjct 97987 CTTCTTGACGA-CTTCATGAACCT-CTTCAGAAATCATAGGTGAGTGACGATCGTTTCTG 98044 Query 72727 GGATTAACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCCTT 72785 || ||||||||| || ||| |||||| | || | ||| ||| || | ||| || | ||| Sbjct 98045 GGGTTAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTT 98103 Query 72786 GTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGT 72845 ||| || || || | || || | || || |||| ||||| || |||||||| || || Sbjct 98104 GTGAAGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGT 98163 Query 72846 ACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 72899 | | || || |||| ||||| || |||| | ||||| || || || || Sbjct 98164 CATACTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 98217 >seq28 Length=170371 Score = 183 bits (202), Expect = 4e-41 Identities = 489/744 (66%), Gaps = 15/744 (2%) Strand=Plus/Plus Query 41755 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTT 41814 || ||||||||| || |||||||| || ||||| || ||||| ||||| ||||| Sbjct 13700 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 13759 Query 41815 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttttt 41874 || ||||||| ||||| ||||||||||| || ||||||| ||||| || | || || Sbjct 13760 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 13819 Query 41875 AAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTC 41934 ||||| | | || |||||| || | || || | ||| ||||| | || Sbjct 13820 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 13879 Query 41935 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 41994 |||||| || | || | || || | ||| | | | | || || |||||| Sbjct 13880 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 13939 Query 41995 GACCGCGTCTGTTATAATA-GATCTT-----ACTGTTTCTTCACTCGGTGGATACAATAA 42048 ||| || || || | |||| | ||| | | | || ||| | | || Sbjct 13940 GACTGCTTCAGTAAGAATACGTTCTATAACAAAGGGTGCT------GGTCTGTTCTCCAA 13993 Query 42049 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTC 42108 ||| | | | | ||| ||||||||| || |||||||| || | | ||| || || Sbjct 13994 ATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTC 14053 Query 42109 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAA 42168 ||| || || | || ||||| |||||||| ||||| ||||| || |||| ||||| Sbjct 14054 GTTACTGAAGGTCAAACCCGGCATAAGGCCACGTTTTTTGAGCCAGAAAATAGCAGCAAA 14113 Query 42169 TGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC 42228 ||||| || ||||| | || || || || || || |||| |||| ||| | ||| Sbjct 14114 GGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCAACTAGTCGCTCAGCGAAACT 14173 Query 42229 GGCA--CT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 42285 || || |||| ||||| ||||||| | ||||||||| | | ||| || Sbjct 14174 AGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAAT 14233 Query 42286 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGAT 42345 ||| ||||||| ||| || | | ||| ||| | || || || || || || || Sbjct 14234 CGTGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAAT 14293 Query 42346 CAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 42405 | |||||| ||||| || || |||||||| || || ||||| |||||||| || || Sbjct 14294 AAGAAGACTGTACATCTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCA 14353 Query 42406 TCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTAT 42465 ||||||| | | || || |||| || | | | || || || ||||| || Sbjct 14354 CTTGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAAT 14413 Query 42466 TCCGTCACTGGCTGCAAAAAACGC 42489 |||||||| || ||||||||||| Sbjct 14414 ACCGTCACTAGCGGCAAAAAACGC 14437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138268794360