Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq28 129 9e-25
seq17 86.0 9e-12
>seq28
Length=170371
Score = 129 bits (142), Expect = 9e-25
Identities = 229/332 (69%), Gaps = 4/332 (1%)
Strand=Plus/Minus
Query 125231 GTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290
|||||||||||||||||| || ||||| |||||| | ||||| || |||||| | ||
Sbjct 14354 GTGCTTTTACGGATTCCAGATTATGATGGAGAACATTCACTCTGAGATGTACAGTCTTCT 14295
Query 125291 GATTGACATGTACATTCGCGATCCGCAACGTAAACACA--TGCTCTTTAACGCAATCGAC 125348
||||||| ||| | || | | | || | || | || ||| | || || |
Sbjct 14294 TATTGACACTTACGTCAAGGAAACTAA--GGAATCCCAGTTCCTTTTTGATGCCATTTTC 14237
Query 125349 ACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAG 125408
||| | || | || | || ||||| | |||| |||| ||||| |||||| |
Sbjct 14236 ACGATTCCTGCCATTCAGAAGAAGGCCAAGTGGGCTCTTCGCTGGATTACTGACGAGGAA 14177
Query 125409 TCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGT 125468
|| | ||| || |||| || |||||||| || || ||||| | ||||| || ||
Sbjct 14176 GCTAGTTTCGCTGAGCGACTAGTTGCATTCGCAGCTGTTGAGGGTGTTTTCTTCTCAGGA 14117
Query 125469 AGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528
||||| || || || |||||||| || || || || ||||| || |||| ||||
Sbjct 14116 TCCTTTGCTGCTATTTTCTGGCTCAAAAAACGTGGCCTTATGCCGGGTTTGACCTTCAGT 14057
Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACA 125560
|||||||| || ||||| |||||||| || ||
Sbjct 14056 AACGAGTTGATTTCTCGTGACGAGGGTCTTCA 14025
>seq17
Length=239553
Score = 86.0 bits (94), Expect = 9e-12
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| ||||| ||||| ||| | || | || | ||||| ||||| | ||
Sbjct 97503 CAGGGTGGCAACAAACGTCCAGGTGCTTTCGCTATTTATCTTGAACCCTGGCATGATGAT 97444
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
||||||||||| ||||| | || || ||| |||| ||||| | || ||| | ||
Sbjct 97443 GTTTTTGACTTCATCGATCTTCGTAAGAACACTGGTAAGGAAGAAGTCCGTGCCCGTGAT 97384
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA 97042
|||||| || || ||| | || || || ||||||||| | || ||
Sbjct 97383 CTGTTTTTGGCTCTTTGGATTCCTGACTTATTCATGAAGAGAGTTAA 97337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058171780360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |