Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq28 129 9e-25 seq17 86.0 9e-12 >seq28 Length=170371 Score = 129 bits (142), Expect = 9e-25 Identities = 229/332 (69%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 125231 GTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290 |||||||||||||||||| || ||||| |||||| | ||||| || |||||| | || Sbjct 14354 GTGCTTTTACGGATTCCAGATTATGATGGAGAACATTCACTCTGAGATGTACAGTCTTCT 14295 Query 125291 GATTGACATGTACATTCGCGATCCGCAACGTAAACACA--TGCTCTTTAACGCAATCGAC 125348 ||||||| ||| | || | | | || | || | || ||| | || || | Sbjct 14294 TATTGACACTTACGTCAAGGAAACTAA--GGAATCCCAGTTCCTTTTTGATGCCATTTTC 14237 Query 125349 ACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAG 125408 ||| | || | || | || ||||| | |||| |||| ||||| |||||| | Sbjct 14236 ACGATTCCTGCCATTCAGAAGAAGGCCAAGTGGGCTCTTCGCTGGATTACTGACGAGGAA 14177 Query 125409 TCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGT 125468 || | ||| || |||| || |||||||| || || ||||| | ||||| || || Sbjct 14176 GCTAGTTTCGCTGAGCGACTAGTTGCATTCGCAGCTGTTGAGGGTGTTTTCTTCTCAGGA 14117 Query 125469 AGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528 ||||| || || || |||||||| || || || || ||||| || |||| |||| Sbjct 14116 TCCTTTGCTGCTATTTTCTGGCTCAAAAAACGTGGCCTTATGCCGGGTTTGACCTTCAGT 14057 Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACA 125560 |||||||| || ||||| |||||||| || || Sbjct 14056 AACGAGTTGATTTCTCGTGACGAGGGTCTTCA 14025 >seq17 Length=239553 Score = 86.0 bits (94), Expect = 9e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| ||||| ||||| ||| | || | || | ||||| ||||| | || Sbjct 97503 CAGGGTGGCAACAAACGTCCAGGTGCTTTCGCTATTTATCTTGAACCCTGGCATGATGAT 97444 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 ||||||||||| ||||| | || || ||| |||| ||||| | || ||| | || Sbjct 97443 GTTTTTGACTTCATCGATCTTCGTAAGAACACTGGTAAGGAAGAAGTCCGTGCCCGTGAT 97384 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA 97042 |||||| || || ||| | || || || ||||||||| | || || Sbjct 97383 CTGTTTTTGGCTCTTTGGATTCCTGACTTATTCATGAAGAGAGTTAA 97337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058171780360