Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq29 118 2e-21
seq28 118 2e-21
seq58 107 4e-18
>seq29
Length=154453
Score = 118 bits (130), Expect = 2e-21
Identities = 149/202 (74%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||| || || |||||||| || || | || ||||| || ||||| |||
Sbjct 41673 GTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGTTTGCCA 41732
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|| || || || | ||||| |||||||| || ||||| ||||| ||| |||||| ||
Sbjct 41733 GCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTAAT-TTTGCTCTT 41791
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||| || | ||| || | | ||| ||||| || || |||||||| || || || ||
Sbjct 41792 TACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTTTCCTGTTAGAGT 41851
Query 104542 TTTTACAAATATCTGCATTTTG 104563
|| | || ||||||||||||
Sbjct 41852 CTTGATGAAAATCTGCATTTTG 41873
>seq28
Length=170371
Score = 118 bits (130), Expect = 2e-21
Identities = 486/753 (65%), Gaps = 24/753 (3%)
Strand=Plus/Minus
Query 268854 TTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT 268913
|||| ||||||||||| | |||||| ||||| || || || || | || | ||||
Sbjct 14442 TTCTAGCGTTTTTTGCCGCTAGTGACGGTATTGTGAATGAGAACTTGGTTTCCAGGTTCA 14383
Query 268914 GTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAA 268973
|| || || || |||| |||| || ||||||||||||||||| || || |
Sbjct 14382 GTACTGACGTTGGTATCTCTGAGGCCAAGTGCTTTTACGGATTCCAGATTATGATGGAGA 14323
Query 268974 ATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAA 269033
| ||||| || |||||||||||||| | || || ||||| | | || | || |||
Sbjct 14322 ACATTCACTCTGAGATGTACAGTCTTCTTATTGACACTTACGTCAAGGAAACTAAGGAAT 14263
Query 269034 AGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTG--TGAGaaaaaaaTCTGAATG 269091
| || ||| | | || || || ||| | |||| || | | ||
Sbjct 14262 CCCAGTTCCTTTTTGATGCCATTTTCACGATTC-CTGCCATTCAGAAGAAGGCCA-AGTG 14205
Query 269092 GGCTCTGAAATGGATAA---ACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGC 269148
|||||| ||||| | |||| || || || || | ||||||| || ||
Sbjct 14204 GGCTCTTCGCTGGATTACTGACGAGGAAGCTAGTTTCGCTGAGCGACTAGTTGCATTCGC 14145
Query 269149 CGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAG 269208
||||| || ||| | ||||| || || || ||||| ||||| || ||| | || ||| |
Sbjct 14144 AGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAACG 14085
Query 269209 AGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268
||||||||||| || || || ||| |||||| ||||| | ||||| ||| | ||
Sbjct 14084 TGGCCTTATGCCGGGTTTGACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCA 14025
Query 269269 CTGCGACTTCGCTTGTTTATTATTTA-CTAATTATCTTTCACACAA--ACCTTCTCAAGA 269325
||| ||||||||| | | | | | | || || || | ||| | | |
Sbjct 14024 TACCGATTTCGCTTGTCTCCTTTACAGCCATTTGGAGAACAGACCAGCACCCT-TTGTTA 13966
Query 269326 TAGA--GTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAA 269383
|||| |||| | ||| || ||| | | || || | || | ||| | ||
Sbjct 13965 TAGAACGTATTC----TTACTGAAGCAGTCGATATTG-AGCAGGAGTACTTC--AGAGAT 13913
Query 269384 GCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTC 269443
||| | || || ||| ||||||||||| | | | |||| | ||| | ||||
Sbjct 13912 GCTTTGCCTGTCAGTCTACTCGGTATGAATGCCGACTTAATGAACCAGTATGTCGAGTTT 13853
Query 269444 GTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAA--AATATAACGTTGAAAATC 269501
|| |||||||| |||| || |||| || | || | || || || || | ||||
Sbjct 13852 GTGGCTGATAGACTGCTCGTAGCTTT--GGGTCAGAACAAGGTGTACAATGTCGCCAATC 13795
Query 269502 CGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGG 269561
| || ||| ||||||||||| ||||| | |||||| | ||||||||||||||||| |
Sbjct 13794 CTTTCGATTTCATGGAGAATATTTCATTGGCTGGTAAGACCAATTTCTTCGAGAAGCGTG 13735
Query 269562 TAAGTAACTATCAGAAAATGGGTGTAATGTCTA 269594
| |||| || || ||||| |||||||
Sbjct 13734 TTTCAGACTACCAAAAGGCCGGTGTTATGTCTA 13702
>seq58
Length=350062
Score = 107 bits (118), Expect = 4e-18
Identities = 148/202 (73%), Gaps = 4/202 (2%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || |||||||| || || | || || || || ||||| |||
Sbjct 20955 GTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGTTTACCA 20896
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC-CTGAATCTTTGCTTT 104481
|| || || | | ||| || |||||||| || ||||| || || |||| |||| |||||
Sbjct 20895 GCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGA-TCTT-GCTTT 20838
Query 104482 T-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540
| ||| || | ||| || ||| || ||||| || ||||||||||| || || | |
Sbjct 20837 TGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTCCCGTCAACG 20778
Query 104541 TTTTTACAAATATCTGCATTTT 104562
| |||| || |||||||||||
Sbjct 20777 TCTTTATGAAAATCTGCATTTT 20756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151396762495588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |