Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq29 118 2e-21 seq28 118 2e-21 seq58 107 4e-18 >seq29 Length=154453 Score = 118 bits (130), Expect = 2e-21 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || |||||||| || || | || ||||| || ||||| ||| Sbjct 41673 GTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGTTTGCCA 41732 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || || || || | ||||| |||||||| || ||||| ||||| ||| |||||| || Sbjct 41733 GCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTAAT-TTTGCTCTT 41791 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||| || | ||| || | | ||| ||||| || || |||||||| || || || || Sbjct 41792 TACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTTTCCTGTTAGAGT 41851 Query 104542 TTTTACAAATATCTGCATTTTG 104563 || | || |||||||||||| Sbjct 41852 CTTGATGAAAATCTGCATTTTG 41873 >seq28 Length=170371 Score = 118 bits (130), Expect = 2e-21 Identities = 486/753 (65%), Gaps = 24/753 (3%) Strand=Plus/Minus Query 268854 TTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT 268913 |||| ||||||||||| | |||||| ||||| || || || || | || | |||| Sbjct 14442 TTCTAGCGTTTTTTGCCGCTAGTGACGGTATTGTGAATGAGAACTTGGTTTCCAGGTTCA 14383 Query 268914 GTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAA 268973 || || || || |||| |||| || ||||||||||||||||| || || | Sbjct 14382 GTACTGACGTTGGTATCTCTGAGGCCAAGTGCTTTTACGGATTCCAGATTATGATGGAGA 14323 Query 268974 ATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAA 269033 | ||||| || |||||||||||||| | || || ||||| | | || | || ||| Sbjct 14322 ACATTCACTCTGAGATGTACAGTCTTCTTATTGACACTTACGTCAAGGAAACTAAGGAAT 14263 Query 269034 AGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTG--TGAGaaaaaaaTCTGAATG 269091 | || ||| | | || || || ||| | |||| || | | || Sbjct 14262 CCCAGTTCCTTTTTGATGCCATTTTCACGATTC-CTGCCATTCAGAAGAAGGCCA-AGTG 14205 Query 269092 GGCTCTGAAATGGATAA---ACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGC 269148 |||||| ||||| | |||| || || || || | ||||||| || || Sbjct 14204 GGCTCTTCGCTGGATTACTGACGAGGAAGCTAGTTTCGCTGAGCGACTAGTTGCATTCGC 14145 Query 269149 CGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAG 269208 ||||| || ||| | ||||| || || || ||||| ||||| || ||| | || ||| | Sbjct 14144 AGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAACG 14085 Query 269209 AGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268 ||||||||||| || || || ||| |||||| ||||| | ||||| ||| | || Sbjct 14084 TGGCCTTATGCCGGGTTTGACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCA 14025 Query 269269 CTGCGACTTCGCTTGTTTATTATTTA-CTAATTATCTTTCACACAA--ACCTTCTCAAGA 269325 ||| ||||||||| | | | | | | || || || | ||| | | | Sbjct 14024 TACCGATTTCGCTTGTCTCCTTTACAGCCATTTGGAGAACAGACCAGCACCCT-TTGTTA 13966 Query 269326 TAGA--GTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAA 269383 |||| |||| | ||| || ||| | | || || | || | ||| | || Sbjct 13965 TAGAACGTATTC----TTACTGAAGCAGTCGATATTG-AGCAGGAGTACTTC--AGAGAT 13913 Query 269384 GCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTC 269443 ||| | || || ||| ||||||||||| | | | |||| | ||| | |||| Sbjct 13912 GCTTTGCCTGTCAGTCTACTCGGTATGAATGCCGACTTAATGAACCAGTATGTCGAGTTT 13853 Query 269444 GTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAA--AATATAACGTTGAAAATC 269501 || |||||||| |||| || |||| || | || | || || || || | |||| Sbjct 13852 GTGGCTGATAGACTGCTCGTAGCTTT--GGGTCAGAACAAGGTGTACAATGTCGCCAATC 13795 Query 269502 CGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGG 269561 | || ||| ||||||||||| ||||| | |||||| | ||||||||||||||||| | Sbjct 13794 CTTTCGATTTCATGGAGAATATTTCATTGGCTGGTAAGACCAATTTCTTCGAGAAGCGTG 13735 Query 269562 TAAGTAACTATCAGAAAATGGGTGTAATGTCTA 269594 | |||| || || ||||| ||||||| Sbjct 13734 TTTCAGACTACCAAAAGGCCGGTGTTATGTCTA 13702 >seq58 Length=350062 Score = 107 bits (118), Expect = 4e-18 Identities = 148/202 (73%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || |||||||| || || | || || || || ||||| ||| Sbjct 20955 GTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGTTTACCA 20896 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC-CTGAATCTTTGCTTT 104481 || || || | | ||| || |||||||| || ||||| || || |||| |||| ||||| Sbjct 20895 GCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGA-TCTT-GCTTT 20838 Query 104482 T-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 | ||| || | ||| || ||| || ||||| || ||||||||||| || || | | Sbjct 20837 TGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTCCCGTCAACG 20778 Query 104541 TTTTTACAAATATCTGCATTTT 104562 | |||| || ||||||||||| Sbjct 20777 TCTTTATGAAAATCTGCATTTT 20756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396762495588