Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq47 87.8 2e-12 seq29 84.2 2e-11 >seq47 Length=387992 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | ||| || | ||||| |||| ||| || ||||| || | |||||| ||| Sbjct 346195 CCACCACGCAAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAA 346254 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||||| ||||| || || | ||||| | | ||||| || |||||| Sbjct 346255 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 346314 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| || || ||| || || ||| || ||| || || Sbjct 346315 ATACCTTCCTTGTCGCTGATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACT 346374 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 |||| ||||| || ||||| || | || || | ||||||||||||| Sbjct 346375 TCAAGAGTGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATG 346422 >seq29 Length=154453 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| || || || || | ||| || || | ||| | ||| || Sbjct 41661 ACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCA 41720 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| || | ||||| | | ||| || || |||||||||||||| || ||| | Sbjct 41721 AGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTA 41780 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| ||| ||||| | | |||||| | || || || | ||||| || ||| Sbjct 41781 ATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTTT 41840 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| || | || |||||||| Sbjct 41841 CCTGTTAGAGTCTTGATGAAAATCTGCAT 41869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290577995960