Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq17 336 3e-87 seq28 188 9e-43 >seq17 Length=239553 Score = 336 bits (372), Expect = 3e-87 Identities = 1380/2150 (64%), Gaps = 63/2150 (3%) Strand=Plus/Plus Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042 |||| ||| | ||||| ||||| | ||| | ||||| | || || ||||| ||||| Sbjct 96092 TCCTGGTCAACCGTGAACTGAATAGCAGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 96151 Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 62101 || ||||| | ||| | ||| ||||| ||||||||||| || || ||| ||| | Sbjct 96152 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTGCCCATAGTT 96211 Query 62102 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62161 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 96212 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 96270 Query 62162 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 62221 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 96271 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 96330 Query 62222 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTC 62276 ||| | |||| || ||| || ||| || |||||| ||| || | |||||| Sbjct 96331 ATCCTGAGGAATCGAGGGGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 96388 Query 62277 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 62336 || || ||||| ||||| | | || | | | || |||| |||||||| Sbjct 96389 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 96448 Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | Sbjct 96449 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 96508 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | | | Sbjct 96509 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGA 96568 Query 62457 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 62516 ||| | | ||| || | ||| | |||| | || ||||| | ||| | || Sbjct 96569 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 96628 Query 62517 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT-----C 62571 | ||| ||| | |||| | | | || || | | | Sbjct 96629 GTAGGTGTAACGCCCCAAAGA-----TCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 96683 Query 62572 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 62631 || | || || || || || || || || ||| | || | || || | || Sbjct 96684 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTG 96743 Query 62632 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 62691 | | ||| ||||| ||||| |||| |||| || ||||| || || || ||||| | Sbjct 96744 CATGATATATGGTCTCGAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAG 96803 Query 62692 GATAATTTAAG-AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTA 62750 | | | | || | || || || || || || || | |||||| | | | || |||||| Sbjct 96804 GC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTA 96862 Query 62751 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62810 || | | | || || ||| ||||| | ||| || ||||| |||| ||||||| | Sbjct 96863 TGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGA 96922 Query 62811 TTGAGATTTCTGACAATTAC-TTTGACCACATCCTTCA---GTTTGAGAAAATCAA-ATC 62865 || | | || | | | || |||||| || || | || | |||| | || | | | Sbjct 96923 TTCA-AGTTATAAGTAATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAAC 96981 Query 62866 GCC--CATCTATT------ACAAA--CATGTTCAAGGCAACAGATGCCAGATTACAAACG 62915 || |||| || ||||| || | | ||||| || ||||||||||| || Sbjct 96982 ACCATCATCCTTTGTCTTTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACATACA 97039 Query 62916 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATA 62975 || || | || | | || | | || ||| ||| | |||| || ||||||| Sbjct 97040 GCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATA 97099 Query 62976 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGA 63035 || || | ||| | ||||||||||| |||| | |||||||||||| ||||| ||| Sbjct 97100 GTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGGA 97159 Query 63036 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTAT 63094 |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || | Sbjct 97160 TTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCATA-GCTTCTGAGCTTTGATGGT 97218 Query 63095 A----GATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTC 63150 | || | || | | | | ||| || |||| || | |||||| || || | Sbjct 97219 ACGACGACCTTTACC--CATACG--TTCATAACGTGTGTAAAGCTCTTCGAATTCATCAC 97274 Query 63151 CCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 63210 | |||||| | | ||||| ||||| | ||||||||||| | ||||||||| ||| Sbjct 97275 CATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAG 97334 Query 63211 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 63270 ||| |||| ||||| || | ||||||||||||||||| | ||| ||||| | || | Sbjct 97335 ACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCAC 97394 Query 63271 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63330 ||| || || || || ||||| |||||||| ||| | | || |||| ||||| Sbjct 97395 GGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCC 97454 Query 63331 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63390 | ||||| | || || || | | | || || |||||||| || |||||||| | || | Sbjct 97455 AGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAAC 97514 Query 63391 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTAC 63450 ||| |||||||| | || | | |||||||| ||||||||| ||| |||| || |||| Sbjct 97515 GAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTAC 97574 Query 63451 CGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCA 63510 ||| ||| || ||| ||||||| ||||| || ||||| || || || || Sbjct 97575 CGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAG 97634 Query 63511 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGA 63570 |||||| || | || || ||||| || ||||| || || || || || || Sbjct 97635 ATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTT 97694 Query 63571 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 63630 ||||| || || ||||| | |||||| | | ||| || ||||| | || | Sbjct 97695 TCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAG 97754 Query 63631 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCTGAG 63689 | ||||||||||| || || | || | || | | | ||| || || || | || || Sbjct 97755 TGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAG 97814 Query 63690 TCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC- 63748 || | | ||| || || | || || | ||| | ||| ||||| || | ||| Sbjct 97815 -GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTCG 97873 Query 63749 --AACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63806 ||| | || | ||||| |||||| || | ||| ||||| ||||| || Sbjct 97874 TGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAAG 97930 Query 63807 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG 63866 || |||||| || || || | |||| || | | | || || | | || || Sbjct 97931 TAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTTC 97990 Query 63867 TTAACTATATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 63924 || || | | |||| | ||| ||||| || || || || | ||| | || | Sbjct 97991 TTGACGA-CTTCATGAACCT-CTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGGT 98048 Query 63925 TAACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCCTTGTGT 63983 |||||||| || ||| |||||| | || | ||| ||| || | ||| || | |||||| Sbjct 98049 TAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTGA 98107 Query 63984 AGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAA 64043 || || || | || || | || || |||| ||||| || |||||||| || || | Sbjct 98108 AGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCATA 98167 Query 64044 GTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 64093 | || || |||| ||||| || |||| | ||||| || || || || Sbjct 98168 CTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 98217 >seq28 Length=170371 Score = 188 bits (208), Expect = 9e-43 Identities = 490/744 (66%), Gaps = 15/744 (2%) Strand=Plus/Plus Query 32994 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 33053 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 13700 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 13759 Query 33054 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttttt 33113 || ||||||| ||||| ||||||||||| || ||||||| ||||| || | || || Sbjct 13760 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 13819 Query 33114 AAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTC 33173 ||||| | | || |||||| || || || || | ||| ||||| | || Sbjct 13820 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 13879 Query 33174 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGA 33233 |||||| || | || | || || | ||| | | | | || || ||||| Sbjct 13880 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 13939 Query 33234 TACCGCATCTGTTATAATA-GATCTA-----ACGGTTTCTTCACTCGGTGGATGCAATAA 33287 || || || || | |||| | |||| | || | || ||| | | || Sbjct 13940 GACTGCTTCAGTAAGAATACGTTCTATAACAAAGGGTGCT------GGTCTGTTCTCCAA 13993 Query 33288 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTC 33347 ||| | | | | ||| ||||||||| || ||||||||||| | | ||| | || Sbjct 13994 ATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTC 14053 Query 33348 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAA 33407 ||| || || | || ||||| |||||||| ||||| ||||| || || | ||| || Sbjct 14054 GTTACTGAAGGTCAAACCCGGCATAAGGCCACGTTTTTTGAGCCAGAAAATAGCAGCAAA 14113 Query 33408 TGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC 33467 ||||| || ||||| | || || || || || || |||| |||| ||| | ||| Sbjct 14114 GGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCAACTAGTCGCTCAGCGAAACT 14173 Query 33468 GGC--GCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 33524 || || |||| ||||| ||||||| | ||||||||| | | ||| || Sbjct 14174 AGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAAT 14233 Query 33525 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 33584 ||| ||||||| ||| || | | ||| ||| | || || || ||||| || || Sbjct 14234 CGTGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAAT 14293 Query 33585 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 33644 | |||||| ||||| || || |||||||| || || ||||| |||||||| || || Sbjct 14294 AAGAAGACTGTACATCTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCA 14353 Query 33645 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTAT 33704 | ||||| | || || || |||| || | |||| || |||||||| || Sbjct 14354 CTTGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAAT 14413 Query 33705 TCCGTCACTGGCTGCAAAAAACGC 33728 |||||||| || ||||||||||| Sbjct 14414 ACCGTCACTAGCGGCAAAAAACGC 14437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946335660760