Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq17 250 6e-61 seq28 123 6e-23 >seq17 Length=239553 Score = 250 bits (276), Expect = 6e-61 Identities = 1113/1733 (64%), Gaps = 46/1733 (3%) Strand=Plus/Minus Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492 ||||||| | || ||||| || ||||||||| | ||| | |||||||||||||||||| Sbjct 97887 AATGGTGTTGTTCACGAACGTCCACAGCATATGATCATGAGAGTTGCTATTGGTATCCAT 97828 Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCA 363550 | | | | | || |||||||| | ||| | || | | ||| |||| Sbjct 97827 GGTTTTAACATCCCTAAGGTCATCGAAACATACGA-CTTG-ATGTCCAACAAGTACTTCA 97770 Query 363551 CGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCT 363610 | ||||| | || || |||||||||| || |||| | || || ||| ||| || | Sbjct 97769 CCCACGCTTCTCCCACTTTGTACAATGCCGGTACTCCCAGACCTCAAATGAGTTCGTGTT 97710 Query 363611 TTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTG 363670 | ||| | ||||| ||||| || ||||| || || | ||| || || || ||||| Sbjct 97709 TCCTTGTTTGCATGAAAGACGACTCTATCGATGGCATTTATGATACCCTAAAATCTTGTG 97650 Query 363671 CTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAG 363729 |||||||||| || ||| || || |||||| | | |||||| | ||||| || | Sbjct 97649 CTCTTATTTCTAAATCTGCTGGTGGTATTGGTCTTAATGTTCACAATATCCGTGCCACTG 97590 Query 363730 AACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGT 363788 |||||| ||| || || ||| || || || | |||| ||||||||||| Sbjct 97589 GTTC-TTACATCGCCGGTACTAACGG-TACATCCAACGGTATTCTTCCAATGCTTCGTGT 97532 Query 363789 GTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGC 363848 || | || ||||| | || || || |||||||| || || ||| || || || Sbjct 97531 CTTCAATAACACTGCTCGTTATGTTGATCAGGGTGGCAACAAACGTCCAGGTGCTTTCGC 97472 Query 363849 TATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACAC 363908 ||| ||||| || || |||| ||| ||||||| || | || || || || ||||| Sbjct 97471 TATTTATCTTGAACCCTGGCATGATGATGTTTTTGACTTCATCGATCTTCGTAAGAACAC 97412 Query 363909 GGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTT 363968 || || || ||| | ||||| ||||||||||| | || |||||| || ||||| || Sbjct 97411 TGGTAAGGAAGAAGTCCGTGCCCGTGATCTGTTTTTGGCTCTTTGGATTCCTGACTTATT 97352 Query 363969 TATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGG 364028 |||||| | || || | | | | ||| || | | || || ||||||| || || Sbjct 97351 CATGAAGAGAGTTAAGTCTGATGGAGAGTGGACATTGATGTGTCCCAACGAATGCCCTGG 97292 Query 364029 TCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA-GG 364087 |||| | ||||| | ||||| || | | | || ||| | |||||| || | || Sbjct 97291 TCTTGCTGATGTTTATGGTGATGAATTCGAAGAGCTTTACACACGTTATGAA-CGTATGG 97233 Query 364088 GAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGA 364147 | || | |||| || || || ||||||||||||| ||||| |||| | || | Sbjct 97232 GTAAAGGTCGTCGTACCATCAAAGCTCAGAAGCTATGGTACGCCATTTTGGAAGCTCAAA 97173 Query 364148 TTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGC 364207 ||||||||| | || | ||| | || || ||| | ||||||||| || |||| Sbjct 97172 CTGAGACAGGTAATCCTTTCATGCTTTATAAGGATCAGGCTAACCGCAAGAGTAATCAGC 97113 Query 364208 AGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCT 364266 | |||||||| | ||| || | || | || || || |||| ||| | | Sbjct 97112 GTAATCTTGGTACTA-TCAAGAGTTCTAATTTGTGCTGTGAAATCGTTGAGTACTCTAGT 97054 Query 364267 CCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA----- 364321 || || || ||||| |||||||| || || || | || || || || ||||||| Sbjct 97053 CCTGAGGAAACTGCTGTATGTAATCTGGCTTCAGTTGCTCTCCCTGCCTTTGTAAAGACA 96994 Query 364322 ----AAGATGGTACT---TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374 | |||||| | | ||| | ||||| | |||| || | | | |||| Sbjct 96993 AAGGATGATGGTGTTCTCTATGATTTCAAGCATTTGCATGAGGTTGTCAAATCTATTACT 96934 Query 364375 TGCAATCTCGA--CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTT 364432 | || || || ||| ||||||| |||||||| || || | || || || |||| Sbjct 96933 TATAA-CTTGAATCAA-ATTATCGATAAGAATTACTACCCTGTCCCAGAGGCTCGTCGTT 96876 Query 364433 CTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGA 364492 | || ||||||||| | ||||||| | | ||||| | ||| | || || | ||| | | Sbjct 96875 CCAACATGCGTCATAGACCGATTGCTTTGGGTGTTAATGGCTTGGCAGATGCTTTCTTTA 96816 Query 364493 TGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAA 364552 |||||| || | ||||| || | || || | | || |||| |||| || || | Sbjct 96815 TGCTCAGACTGCCTTTTGACTCCCAAGAGGCCCAAGAGCTTAATATTCAGATATTCGAGA 96756 Query 364553 CAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACT 364612 | || ||| ||| || | ||||| || | || || | || || Sbjct 96755 CCATATATCATGCAGCTGTTGAAGCTTCTATCGAGATTGCTAAGGTTGATGGTCCTTATG 96696 Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGG--AAAATTCCAGTTTGATCTATGGAATGT 364670 ||||| || || ||| |||| | || | |||| | ||||| ||| || Sbjct 96695 AGACTTACGAAGGCAGTCCTGCTTCGGAAGGTCAGCTTTCC--TACGATCTTTGGGGCGT 96638 Query 364671 CACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTAC 364730 || || ||| | ||| |||||||||| | || | | |||||| ||||| Sbjct 96637 TACACCTACTGACTTGTGGGACTGGGATACTTTGAAAGCCGATCTCAAGAAGTATGGTTT 96578 Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790 || || || || | ||| || ||||| || ||||||||| | || ||| | || | Sbjct 96577 GCGTAATTCTCTTCTAGTAGCACCTATGCCTACTGCTTCTACTTCTCAAATCTTAGGCTA 96518 Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTT-TATTCACGCCGGGTTCTTTCCGGAG 364849 ||| || || ||||| || || || ||| ||| || || | | || | | || | Sbjct 96517 CAATGAATGTTTCGAGCCTTTCAC-CTCAAACTTCTACTCTAGAAGAGTCTTGGCTGGTG 96459 Query 364850 AATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTG 364909 |||| | | |||||| || || ||||||| ||| || || || ||| | Sbjct 96458 AATTCCAAATCGTTAATCCCTATCTTCTCAAGGACCTTGTTGATATGGGTCTCTGGAACG 96399 Query 364910 ACAGCATGAAGAACTATA-TCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTT 364968 | |||||||| || | | || || | ||||||| | | |||| || || Sbjct 96398 ATGATATGAAGAA-TAGATTGATTGCAAGTGGTGGTTCTATTAAAGACATCCCCTCGATT 96340 Query 364969 CCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGA--ACTCTCA 365026 || | ||| | ||| | | ||||| ||||| ||||||| || | || || | | Sbjct 96339 CCTCAGGATATTAAGGATCTATACAAGACCGTCTGGGAAA--TCAGTCAGAAGACCATTA 96282 Query 365027 TTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086 |||||||||| |||| ||| ||| |||| || ||||| ||| || || | | || Sbjct 96281 TTGATATGGCTGCCGCTCGTGGTCCTTTCATTGACCAGAGTCAGAGTTTGAATATTTACA 96222 Query 365087 TGACTCAG---CCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGG 365136 || ||| ||||| | |||||| || |||||||||||||| ||| Sbjct 96221 TG---CAGGCCCCAACTATGGGCAAGCTCACTAGTATGCATTTCTACGGTTGG 96172 >seq28 Length=170371 Score = 123 bits (136), Expect = 6e-23 Identities = 361/553 (65%), Gaps = 26/553 (5%) Strand=Plus/Minus Query 22411 GCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGA-- 22468 || ||| ||| |||| | ||| |||| ||||| | ||||| || ||||| | Sbjct 14245 GCCATTTTCACGATTCCTGCCATTCAGAAGAAGGCCAAGTGGGCTCTTCGCTGGATTACT 14186 Query 22469 -ACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTC 22527 || | ||| | ||||| || || || ||||||| || | ||||| || ||||| Sbjct 14185 GACGAGGAAGCTAGTTTCGCTGAGCGACTAGTTGCATTCGCAGCTGTTGAGGGTGTTTTC 14126 Query 22528 TTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTA 22587 || || ||| | ||| ||| || || ||||| |||||||||| ||||||||||| | Sbjct 14125 TTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAACGTGGCCTTATGCCGGGTTTG 14066 Query 22588 ACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATG 22647 || || || ||||| ||| || || |||||||||||||||||||| || ||| | Sbjct 14065 ACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCATACCGATTTCGCTTGTCTC 14006 Query 22648 CTATA-------TCGGA-ATCATATCATTCATAAACTTCCATATGAAACTGTACTTGATA 22699 || || | ||| | || | || | ||| ||| ||| || Sbjct 14005 CTTTACAGCCATTTGGAGAACAGACCA---GCACCCTTTGTTATAGAAC--------GTA 13957 Query 22700 TTATTACAAATGCAGTTGAACTTGA--ACGTCTATTTATTTGCGAGGCGTTACCAGTAAG 22757 || |||| | ||||| || |||| | | || | | | || || || || || || Sbjct 13956 TTCTTACTGAAGCAGTCGATATTGAGCAGGAGTACT--TCAGAGATGCTTTGCCTGTCAG 13899 Query 22758 TCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCT 22817 ||| | ||||| |||||||| | ||||| ||| | | ||||| || ||| | || Sbjct 13898 TCTACTCGGTATGAATGCCGACTTAATGAACCAGTATGTCGAGTTTGTGGCTGATAGACT 13839 Query 22818 ATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGA 22877 | | | | ||| | ||| || || |||| ||||| || || | ||||| Sbjct 13838 GCTCGTAGCTTTGGGTCAGAACAAGGTGTACAATGTCGCCAATCCTTTCGATTTCATGGA 13779 Query 22878 ACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAA 22937 ||||||| | | || ||||||||||||||||| || | ||| || |||||||| Sbjct 13778 GAATATTTCATTGGCTGGTAAGACCAATTTCTTCGAGAAGCGTGTTTCAGACTACCAAAA 13719 Query 22938 AGCAGGTGTTATG 22950 || ||||||||| Sbjct 13718 GGCCGGTGTTATG 13706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351746386802