Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq81 132 3e-26
seq47 84.2 1e-11
>seq81
Length=10970
Score = 132 bits (146), Expect = 3e-26
Identities = 85/93 (91%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 8638 GCCCGTTCCCATGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 8579
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 8578 ATCCATTCATGCGCGTCACTAATTAGATGACGA 8546
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| ||||||||||| ||||||||| ||||||||||| |
Sbjct 6774 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACAGTACTTGTTTACTATCGGTCTCTC 6715
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||| |||
Sbjct 6714 GCAGATATTTAGCTTTA 6698
>seq47
Length=387992
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | |||||| | |||||||| |||||| |||||| || || || || || ||
Sbjct 346194 ACCACCACGCAAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGA 346253
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
| | || |||| || | || || || || || || || || || || || | ||
Sbjct 346254 AAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 346313
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| ||||| | || || ||||||| | || ||||| | || ||
Sbjct 346314 AATACCTTCCTTGTCGCTGATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCAC 346373
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
||| | || ||||| || || |||||||| || | || |||||||||||
Sbjct 346374 TTCAAGAGTGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTT 346424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946746879241
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |