Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq17 360 2e-94 seq28 192 7e-44 >seq17 Length=239553 Score = 360 bits (398), Expect = 2e-94 Identities = 1385/2150 (64%), Gaps = 63/2150 (3%) Strand=Plus/Plus Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897 |||| ||| | ||||| ||||| | ||| | ||||| | || || ||||| ||||| Sbjct 96092 TCCTGGTCAACCGTGAACTGAATAGCAGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 96151 Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 61956 || ||||| | ||| | ||| ||||| ||||||||||| || || ||| ||| | Sbjct 96152 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTGCCCATAGTT 96211 Query 61957 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62016 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 96212 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 96270 Query 62017 AGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 62076 |||||| | ||||| ||||| || |||||||| | || || || | |||||| Sbjct 96271 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 96330 Query 62077 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTC 62131 ||| | |||| || ||| || ||| || |||||| ||| || | |||||| Sbjct 96331 ATCCTGAGGAATCGAGGGGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 96388 Query 62132 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 62191 || || ||||| ||||| | | || | | | || |||| |||||||| Sbjct 96389 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 96448 Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | | Sbjct 96449 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 96508 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | | | Sbjct 96509 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGA 96568 Query 62312 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 62371 ||| | | ||| || | ||| | |||| | || ||||| | ||| | || Sbjct 96569 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 96628 Query 62372 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT-----C 62426 | ||| ||| | |||| | | | || || | | | Sbjct 96629 GTAGGTGTAACGCCCCAAAGA-----TCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 96683 Query 62427 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 62486 || | || || || || || || || || ||| | || | || || | || Sbjct 96684 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTG 96743 Query 62487 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATG 62546 | | ||| ||||| ||||| |||| |||| || ||||| || || || ||||| | Sbjct 96744 CATGATATATGGTCTCGAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAG 96803 Query 62547 GATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 62605 | | | | || | || || || ||||| || || | |||||| | | | || |||||| Sbjct 96804 GC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTA 96862 Query 62606 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62665 || | | | || || ||| ||||| | ||| || ||||| |||| ||||||| | Sbjct 96863 TGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGA 96922 Query 62666 TTGAGATTTCTGACAATTAC-TTTGACCACATCCTTCA---GTTTGAGAAAATCAA-ATC 62720 || | | || | | | || |||||| || || | || | |||| | || | | | Sbjct 96923 TTCA-AGTTATAAGTAATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAAC 96981 Query 62721 GCC--CATCTATT------ACAAA--CATGTTCAATGCAACAGATGCCAGATTACAAACG 62770 || |||| || ||||| || | | ||||| || ||||||||||| || Sbjct 96982 ACCATCATCCTTTGTCTTTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACATACA 97039 Query 62771 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATG 62830 || || | || | | || | | || ||| ||| | |||| || |||||| Sbjct 97040 GCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATA 97099 Query 62831 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGA 62890 || || | ||| | ||||||||||| |||| | |||||||||||| ||||| ||| Sbjct 97100 GTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGGA 97159 Query 62891 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTAT 62949 |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || | Sbjct 97160 TTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCATA-GCTTCTGAGCTTTGATGGT 97218 Query 62950 AGATTTGTATCTCTTTTCTCTTTCGT--ATA--GTGTATACAATCGTTCGAACTCGTCTC 63005 | | |||| | | | ||| ||| |||| || | |||||| || || | Sbjct 97219 AC----GACGACCTTTACCCATACGTTCATAACGTGTGTAAAGCTCTTCGAATTCATCAC 97274 Query 63006 CCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 63065 | |||||| | || ||||| ||||| | ||||||||||| | ||||||||| ||| Sbjct 97275 CATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAG 97334 Query 63066 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 63125 ||| |||| ||||| || | ||||||||||||||||| | ||| ||||| | || | Sbjct 97335 ACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCAC 97394 Query 63126 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63185 ||| || || || || ||||| |||||||| ||| | | || |||| ||||| Sbjct 97395 GGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCC 97454 Query 63186 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63245 | ||||| | || || || | | | || || |||||||| || |||||||| | || | Sbjct 97455 AGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAAC 97514 Query 63246 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCC 63305 ||| |||||||| | || | | |||||||| |||||| ||||||||||| || || | Sbjct 97515 GAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTAC 97574 Query 63306 CTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCA 63365 | | ||| || ||| ||||||| ||||| || ||||| || || || || Sbjct 97575 CGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAG 97634 Query 63366 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 63425 |||||| || | || || ||||| |||||||| ||||| || ||| || || Sbjct 97635 ATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTT 97694 Query 63426 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 63485 ||||| || || ||||| | |||||| | | ||| || ||||| | || | Sbjct 97695 TCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAG 97754 Query 63486 TAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCTGAG 63544 | ||||||||||| || || | || | || | | | ||| || || || | || || Sbjct 97755 TGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAG 97814 Query 63545 TCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC- 63603 || | | ||| || || | || || | ||| | ||| ||||| || | ||| Sbjct 97815 -GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTCG 97873 Query 63604 --AACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63661 ||| | || | ||||| |||||| || | ||| ||||| ||||| || Sbjct 97874 TGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAAG 97930 Query 63662 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG 63721 || |||||| || || || | |||| || | | | || || | | || || Sbjct 97931 TAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTTC 97990 Query 63722 TTAACTACATCCATGGTAATACTT--GAAATAATAGGAAAATGTTTCCCATTTTTAGGAT 63779 || || || | ||| | | ||| ||||| ||||| | || | ||| | || | Sbjct 97991 TTGACGAC-TTCAT-GAACCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGGT 98048 Query 63780 TGACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCTTTGTGT 63838 | |||||| || ||| |||||| | || | ||| ||| || | ||| || | ||||| Sbjct 98049 TAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTGA 98107 Query 63839 AGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAA 63898 || || || | || || | || || |||| ||||| || |||||||| || || | Sbjct 98108 AGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCATA 98167 Query 63899 GTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACC 63948 | || || |||| ||||| || |||| | ||||| || || ||||| Sbjct 98168 CTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 98217 >seq28 Length=170371 Score = 192 bits (212), Expect = 7e-44 Identities = 491/744 (66%), Gaps = 15/744 (2%) Strand=Plus/Plus Query 32351 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 32410 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 13700 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 13759 Query 32411 ACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAttttttt 32470 ||| | ||||| ||||| |||||||||||||| ||||||| ||||| || | || || Sbjct 13760 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 13819 Query 32471 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTC 32530 ||||| | | || |||||| || ||||| || | ||| ||||| | || Sbjct 13820 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 13879 Query 32531 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 32590 |||||| || | || | || || | ||| | | | | || || |||||| Sbjct 13880 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 13939 Query 32591 GACCGCGTCTGTTATAATA-GATCTT-----ACTGTTTCTTCACTCGGTGGATACAATAA 32644 ||| || || || | |||| | ||| | | | || ||| | | || Sbjct 13940 GACTGCTTCAGTAAGAATACGTTCTATAACAAAGGGTGCT------GGTCTGTTCTCCAA 13993 Query 32645 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTC 32704 ||| | | | | ||| ||||||||| || ||||||||||| | | ||| || || Sbjct 13994 ATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTC 14053 Query 32705 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 32764 ||| || || | || ||||| |||||||| ||||| ||||| || || | ||||| Sbjct 14054 GTTACTGAAGGTCAAACCCGGCATAAGGCCACGTTTTTTGAGCCAGAAAATAGCAGCAAA 14113 Query 32765 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC 32824 ||||| || ||||||| || || || || || || |||| |||| ||| | ||| Sbjct 14114 GGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCAACTAGTCGCTCAGCGAAACT 14173 Query 32825 GGC--GCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 32881 || || |||| ||||| ||||||| | ||||||||| | | ||| || Sbjct 14174 AGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAAT 14233 Query 32882 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 32941 || || |||| ||| || | | ||| ||| | || || || || || ||||| Sbjct 14234 CGTGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAAT 14293 Query 32942 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCA 33001 | |||||| ||||| || || |||||||| || || || || |||||||| ||||| Sbjct 14294 AAGAAGACTGTACATCTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCA 14353 Query 33002 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 33061 | ||||| | || || || |||| || | | || || |||||||| || Sbjct 14354 CTTGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAAT 14413 Query 33062 TCCGTCACTGGCTGCAAAAAACGC 33085 |||||||| || ||||||||||| Sbjct 14414 ACCGTCACTAGCGGCAAAAAACGC 14437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631120835600