Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq47 116 3e-21
seq29 105 6e-18
>seq47
Length=387992
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||| | ||||| |||||||| || | ||||| | ||||||||||| |
Sbjct 346421 ATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCTAAT 346362
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || ||||| | ||||| || |||| ||||| ||||| ||||| ||||||||
Sbjct 346361 GATACCATCGAAGCTGTGAAGAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAG 346302
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| |||| || || ||||| || | || || | |||||| | ||| || ||
Sbjct 346301 CAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAAC 346242
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || ||||| || ||||| || ||
Sbjct 346241 ATCCAGAAGGAGTCCACTCTGCATTTGGTTCT 346210
>seq29
Length=154453
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || || | |||||| | || || || | ||||| |||| || || ||
Sbjct 41870 AATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCCAA 41811
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||| || ||| | | ||| ||||| | ||| || ||||| ||||| ||||||||
Sbjct 41810 TGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGACCA 41751
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || |||| || || |||||||| | ||||||| ||||| | || |||||
Sbjct 41750 ACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTACAA 41691
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || ||||| ||||| || || || || ||
Sbjct 41690 CATCCAGAAAGAGTCCACTCTTCACTTGGTTCT 41658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327413788465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |