Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq22 93.3 9e-14
>seq22
Length=187262
Score = 93.3 bits (102), Expect = 9e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 280678 TGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGA 280737
||||||| || || ||||| |||||||||| || || |||||||| || || ||||
Sbjct 22993 TGGGTCTTGATCCTGAGTTGGTTTCTCACTCTCGTATCCGTGGTCTTTCCGGTGGTCAGA 23052
Query 280738 AGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCA-ACACCCTCACGTGATCGTTCTCGAC 280796
||||||| |||||| | | || | ||||| | |||| || | || || |||||
Sbjct 23053 AGGTCAAGCTTGTCTTGGCTGCCTGTACTTGGCAGAGACCC-CATCTTATTGTCCTCGAT 23111
Query 280797 GAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACA 280856
|||||||| || ||||| ||||| || |||| ||||| || |||| | | |
Sbjct 23112 GAGCCTACTAATTATCTTGACCGTGATTCGTTGGGTGCTCTCTCTGGTGCTATCAAGAAG 23171
Query 280857 TTTGGCGGCGGCGTCGTAGTCATTTCTCAC 280886
|| | || || ||||| ||||| |||||
Sbjct 23172 TTCGAGGGTGGTGTCGTTATCATTACTCAC 23201
Score = 89.7 bits (98), Expect = 1e-12
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220
|| || |||| ||||||||| ||||||||||| ||||| |||||||| ||||| || ||
Sbjct 22431 TCTCGTATTGCTGTCATTGGTCCCAATGGTGCTGGTAAATCTACCCTTATCAACGTTTTG 22490
Query 280221 ACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCT 280280
||||| ||| | | || |||| |||| | ||| ||| || || ||
Sbjct 22491 ACTGGTGAGCTTTTGCCTACCAAGGGTGAGGTTTACACTCATGAGAACTGCCGTATTGCC 22550
Query 280281 TACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAA 280340
|||||| ||||| || || || ||||| |||||||| |||| ||| || |
Sbjct 22551 TACGTCAAACAGCATGCCTTTGCTCATATCGATAACCACCTTGACAAGACACCCTCTGAG 22610
Query 280341 TACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
|| ||||||||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 22611 TATATTCAGTGGCG-TTTCCAGACTGGTGAGGATCGTGAGACTATGGACCG 22660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835338223351
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |