Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq29 179 7e-40
seq47 134 3e-26
seq58 127 4e-24
seq22 84.2 4e-11
>seq29
Length=154453
Score = 179 bits (198), Expect = 7e-40
Identities = 181/233 (78%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || ||||| || | |||||||| || ||||||||||| |||||||| || || ||
Sbjct 41642 TCCGCCACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGA 41701
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
||| || | |||||||| | ||| || || ||||| || || | ||||||||| || ||
Sbjct 41702 GAGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGG 41761
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
||| |||||||| || ||| ||||| ||| |||||||| |||||||| ||||| |
Sbjct 41762 AATACCTTCCTTATCACTAAT-TTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAA 41820
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
| || | |||||| || ||||| || || ||||||| ||| ||||||||| ||
Sbjct 41821 CCTCGAGGGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTTG 41873
>seq47
Length=387992
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||| || || |||||||| || ||||||||||| ||||| || || | || || ||
Sbjct 346213 ACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCA 346272
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || ||||| || || | || ||||| || ||||| |||||||||||
Sbjct 346273 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 346332
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||| || || |||||||| || || || ||||| | ||||| || |||
Sbjct 346333 ATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTT 346392
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | |||||||| || ||||||||
Sbjct 346393 CCGGTCAAGGTCTTGATAAAGATCTGCAT 346421
>seq58
Length=350062
Score = 127 bits (140), Expect = 4e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| | |||||||| || |||||||| || || ||
Sbjct 20985 CCACCACGGAGACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 20926
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||| || || ||||| || | | || ||||| || |||
Sbjct 20925 AGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGA 20866
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||||||||| ||||| ||||| |||||||||||||| || || ||
Sbjct 20865 ATACCTTCCTTGTCGCTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACC 20806
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| | ||| || || |||||||| | ||||| | ||| |||||||||
Sbjct 20805 TCGAGGGTAATAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATT 20758
>seq22
Length=187262
Score = 84.2 bits (92), Expect = 4e-11
Identities = 152/220 (69%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 224437 GAATTCAGTGCTGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGA 224496
||| |||| | ||||| ||| | || ||||| || |||| || | || ||
Sbjct 23213 GAACTCAGCGGAGTGAGTAATGATAACGACACCACCCTCGAACTTCTTGATAGCACCAGA 23154
Query 224497 AAGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTG 224556
|| || || | ||| || |||||||| | || || |||||||| |||| |||| ||
Sbjct 23153 GAGAGCACCCAACGAATCACGGTCAAGATAATTAGTAGGCTCATCGAGGACAATAAGATG 23094
Query 224557 GGGGCACTGCCACAGGGCTG-CACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGC 224615
||| | |||||| || | | || | | || ||||| ||||||||||| || || || |
Sbjct 23093 GGGTCTCTGCCA-AGTACAGGCAGCCAAGACAAGCTTGACCTTCTGACCACCGGAAAGAC 23035
Query 224616 CGCGGATCCGCGAGTGAGTCGTGAATTCGGGGTCAAGACC 224655
| ||||| || ||||||| || || || ||||||||
Sbjct 23034 CACGGATACGAGAGTGAGAAACCAACTCAGGATCAAGACC 22995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621121248920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |