Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq58 107 2e-18 seq29 87.8 2e-12 >seq58 Length=350062 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || || | |||||||| || ||||||||||| Sbjct 20985 CCACCACGGAGACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 20926 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| |||||||| | |||| | |||||| ||||| ||||| Sbjct 20925 AGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGA 20866 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| |||||| |||| || ||| | || | |||||| | ||||| ||| Sbjct 20865 ATACCTTCCTTGTCGCTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACC 20806 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || || |||| || |||| ||||||||||| Sbjct 20805 TCGAGGGTAATAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCAT 20759 >seq29 Length=154453 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 138384 GCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC 138443 ||| ||||| || | ||| | ||| || || | | ||||| || || ||||||||||| Sbjct 41639 GCATCCGCCACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTC 41698 Query 138444 GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGG 138503 | || || || || || ||||| || | |||| ||||| |||||||| || Sbjct 41699 AGAGAGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGG 41758 Query 138504 AGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTC 138563 ||| |||||||| || || | ||||| |||| || | |||||| | || || Sbjct 41759 AGGAATACCTTCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTC 41818 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || | || || || || ||||| || | ||||||||||| Sbjct 41819 AACCTCGAGGGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCAT 41869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261711435920