Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq58 107 2e-18
seq29 87.8 2e-12
>seq58
Length=350062
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || || || || | |||||||| || |||||||||||
Sbjct 20985 CCACCACGGAGACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 20926
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||||| |||||||| | |||| | |||||| ||||| |||||
Sbjct 20925 AGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGA 20866
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| |||||| |||| || ||| | || | |||||| | ||||| |||
Sbjct 20865 ATACCTTCCTTGTCGCTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACC 20806
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || | || || || |||| || |||| |||||||||||
Sbjct 20805 TCGAGGGTAATAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCAT 20759
>seq29
Length=154453
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 138384 GCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC 138443
||| ||||| || | ||| | ||| || || | | ||||| || || |||||||||||
Sbjct 41639 GCATCCGCCACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTC 41698
Query 138444 GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGG 138503
| || || || || || ||||| || | |||| ||||| |||||||| ||
Sbjct 41699 AGAGAGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGG 41758
Query 138504 AGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTC 138563
||| |||||||| || || | ||||| |||| || | |||||| | || ||
Sbjct 41759 AGGAATACCTTCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTC 41818
Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||||| || | || || || || ||||| || | |||||||||||
Sbjct 41819 AACCTCGAGGGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCAT 41869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261711435920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |