Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq29 109 4e-19 seq47 95.1 9e-15 seq58 89.7 4e-13 >seq29 Length=154453 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||| || || ||||| || |||||||| || ||| | | | ||||| Sbjct 41660 AACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTC 41719 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | |||||||||||| | || | ||| |||||||| ||||| |||||||| |||| Sbjct 41720 AAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACT 41779 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||||||| ||||| || || || || | ||| || || | ||| || || || Sbjct 41780 AATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTT 41839 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 ||||| ||||| || | ||||| ||||| || Sbjct 41840 TCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 41872 >seq47 Length=387992 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| ||||| | | ||| ||||| || || || || || || ||||| || ||| Sbjct 346195 CCACCACGCAAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAA 346254 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | |||| || | || ||||||||| | || | |||||| ||||| ||| Sbjct 346255 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 346314 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| | || ||||| || ||| ||| || ||||| || || || Sbjct 346315 ATACCTTCCTTGTCGCTGATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACT 346374 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || || || || || |||| || || | ||| || ||||| || Sbjct 346375 TCAAGAGTGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTT 346424 >seq58 Length=350062 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || |||| || || || || || |||||||| || || | | | || || Sbjct 20967 ACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCG 20908 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||||| |||||| | ||||||||||| ||||| ||||| ||||||||||| | Sbjct 20907 AGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 20848 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || |||||||| ||| || || || || || || || || | |||||| || || Sbjct 20847 ATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTT 20788 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || |||| || |||| ||||| ||||| || Sbjct 20787 CCCGTCAACGTCTTTATGAAAATCTGCATTTT 20756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391516515635