Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq28 158 1e-33 seq58 107 2e-18 seq29 107 2e-18 seq47 96.9 3e-15 >seq28 Length=170371 Score = 158 bits (174), Expect = 1e-33 Identities = 536/822 (65%), Gaps = 31/822 (4%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || ||||| || || || |||| ||||| | ||| ||||| || || ||| Sbjct 13740 TTCTCGAAGAAATTGGTCTTACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTG 13799 Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATC-AGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 || ||||| |||| | | || | | | |||||||| || || ||||| ||||| Sbjct 13800 GCGACATTGTACACCTTGTT-CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTC 13858 Query 132744 GATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGT 132803 || || || ||| ||| ||| | || || |||| || |||| || || | Sbjct 13859 GACATACTGGTTCATTAAGTCGGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCT 13918 Query 132804 GAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT---TTCCCTAACGCGCGCCGC 132860 || | ||||| || |||| || || || | || ||| |||| | | Sbjct 13919 GAAGTACTCCTGCTCAATATCGACTGCTTCAGTAAGAATACGTTCTATAACAAAGG--GT 13976 Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 ||| | | ||| | ||||||| || | | | ||||| || ||| ||| | ||||| Sbjct 13977 GCTGGTCTGTT-CTCCAAATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTC 14035 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 ||| | ||||| | ||||| ||||| ||||| || ||||| ||||| ||||||||||| Sbjct 14036 GTCACGAGAAATCAACTCGTTACTGAAGGTCAAACCCGGCATAAGGCCACGTTTTTTGAG 14095 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || || || || || || || ||||| || ||||| || || ||||| || || Sbjct 14096 CCAGAAAATAGCAGCAAAGGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCAAC 14155 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 || ||||| |||| | ||||| | | | |||||||| || ||||| | |||||| Sbjct 14156 TAGTCGCTCAGCGAAACTAGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTT 14215 Query 133101 -TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA--AACGGAGTTTCTCTTCCGA 133157 |||| ||| || ||||| ||||| | || | ||| | | ||| ||| | Sbjct 14216 CTTCTGAATGGCA-GGAATCGTGAAAATGGCATCAAAAAGGAACTGGGATTC-CTT---A 14270 Query 133158 GGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATG 133215 | | ||||| ||||| || || ||||| || ||||| | ||||||||| Sbjct 14271 GTTTCCTTGACGTAAGTGTCAATAAGAAGACTGTACATCTCAGAGTGAATGTTCTCCATC 14330 Query 133216 GCGATTTGAAAGCCGTAAAAGCACCGCGCCTC-----GACCACCTGCACTTCTTGAGCGA 133270 || || || |||||||||||| ||||| |||| | || | || || Sbjct 14331 ATAATCTGGAATCCGTAAAAGCACTTGGCCTCAGAGATACCAACGTCAGTACT-----GA 14385 Query 133271 AACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGT 133330 | | |||| || || || || || ||||| || ||||| ||||| || || || Sbjct 14386 ACCTGGAAACCAAGTTCTCATTCACAATACCGTCACTAGCGGCAAAAAACGCTAGAACTC 14445 Query 133331 GCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGG 133387 | || || | || |||| ||| |||| | | |||||||| | | |||| || Sbjct 14446 GTGAAATAAAGTAACGTTCGTCGTCATTCAGCCTAAGTTCCCAGTCCTGAATATCCTGGG 14505 Query 133388 ACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||| || ||||| ||| ||||| || || || || |||| Sbjct 14506 CCAGATCAACCTCTTCGGTTGTCCAGAAAGAAGCTTCAGCTT 14547 >seq58 Length=350062 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||| |||| ||| | ||||| || || || ||| |||| || ||| | Sbjct 20756 AAAATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCT 20815 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | ||| || ||| |||||| || || ||||| | ||| Sbjct 20816 AATGACACCATCGAGGCTGTCAAAAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGAC 20875 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| | || | ||| || |||||||| || || | |||||||| |||||| Sbjct 20876 CAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTAC 20935 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||||| | || | || |||||||| ||| Sbjct 20936 AACATCCAGAAGGAGTCCACTATTCACTTGGTGCTTCGT 20974 >seq29 Length=154453 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||| | || || || || || || || |||||| |||| || || || Sbjct 41872 AAAATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCC 41813 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | | | |||||| ||||| || || || || ||||| | || Sbjct 41812 AATGACACCATTGAGGC-CGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGA 41754 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 |||||| || || || | ||| ||||||||||| || || | ||||||||| ||||| Sbjct 41753 CCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTA 41694 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| || || | || || || ||||| || ||| | | ||||| Sbjct 41693 CAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCTCCGTCTTCGTGGCGG 41643 >seq47 Length=387992 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || ||| |||||| || || ||||| | ||||| ||||| || || | ||| ||||| Sbjct 346337 AAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAG 346278 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || |||| ||||| || ||| || |||||||| ||||| | || |||||| Sbjct 346277 CAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAACATCCAGAAGGAGTCCACTCTGCAT 346218 Query 38448 TTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || |||||| | || || Sbjct 346217 TTGGTTCTCCGTTTGCGTGGTGG 346195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172106010240