Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 131 7e-25 seq27 116 1e-20 seq29 113 2e-19 seq58 91.5 6e-13 >seq1 Length=825974 Score = 131 bits (144), Expect = 7e-25 Identities = 279/413 (68%), Gaps = 9/413 (2%) Strand=Plus/Plus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATT 451255 |||||| ||| | || | || || ||||| || || ||||| ||||||| || || Sbjct 168425 AAGCCCGTCATTGAGGTTGAATACAAGGGTGAGACCAAGACTTTCACTCCTGAGGAGATC 168484 Query 451256 TCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTT 451315 || || |||||||| || || ||||| || || || || || | ||| | ||| Sbjct 168485 TCTTCCATGGTTCTCACCAAGATGAAGGAGACTGCTGAGGGCTACCTCGGTGGTAAGGTT 168544 Query 451316 ACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAA 451375 | | || || |||||||| || ||||| ||||| || | || || || || || || Sbjct 168545 GATCAGGCCGTTATTACTGTCCCTGCTTACTTCAACGACTCCCAGCGTCAGGCTACCAAG 168604 Query 451376 GATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCT 451435 ||||| || |||||||||| | ||||||||||| ||||| ||||| ||||| || ||| Sbjct 168605 GATGCCGGTACTATTGCTGGTCTTAATGTTCTTCGTATTATCAATGAGCCTACCGCTGCT 168664 Query 451436 GCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA-GAAGaaaaaaaTATTTTAGTATT 451494 || | || || || || | | | ||| || | || | || || | | || Sbjct 168665 GCCATTGCCTACGGTCTTG----ACAAGAAGGGCCAGGGTGAGCACAACGTTCTTATCTT 168720 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCA--ATTGAAGATGGGGTATTT 451552 ||||| ||||| || || ||| ||| | ||| | ||||| || || | || Sbjct 168721 CGATTTGGGTGGTGGTACCTTCGAT--GTCTCTCTTTTGAGCATTGATGACGGTATCTTC 168778 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| || |||||||||||| | || ||||| ||| | ||||| Sbjct 168779 GAGGTCAAGGCCACTGCTGGTGATACTCACTTGGGTGGTGAGGATTTCGATAA 168831 >seq27 Length=172996 Score = 116 bits (128), Expect = 1e-20 Identities = 203/295 (69%), Gaps = 9/295 (3%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || ||||||| |||||||| ||||||||| | || || |||||||| || |||| Sbjct 105409 ATGCCGTTGTTACTGTCCCCGCTTACTTCAATGATTCTCAGCGTCAAGCAACCAAGGATG 105468 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || |||| ||||| || ||| | || || |||| || || || || |||||| Sbjct 105469 CTGGCCAGATTGTCGGTTTGAACGTTTTGAGAGTTGTTAACGAGCCCACCGCTGCTGCTT 105528 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 | || || || || | | |||| | || || || ||| || || ||| Sbjct 105529 TGGCTTACGGTCTTG-------AGAAGA--CTGACGATAAGGTCATTGCCGTCTTCGATC 105579 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 ||||||| || || |||| ||| | ||| || | | || || || || || | Sbjct 105580 TTGGTGGTGGTACCTTCGATATCTCTATTCTTGAGATCCAGAAGGGTGTCTTCGAGGTCA 105639 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614 || | || || ||||||||||| || || ||||| ||| | |||| ||| ||||| Sbjct 105640 AGTCCACTAACGGTGATACTCACCTTGGTGGTGAGGATTTCGATATTGCCATTGT 105694 >seq29 Length=154453 Score = 113 bits (124), Expect = 2e-19 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||| | || || || || || || ||||| || || || |||||||| Sbjct 41870 AATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCCAA 41811 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| || | || |||||| ||||||||||| ||||||||||| || Sbjct 41810 TGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGACCA 41751 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||| | || ||| | || ||||| ||||||||||| | || | | || || || Sbjct 41750 ACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTACAA 41691 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || | || |||||||| || Sbjct 41690 CATCCAGAAAGAGTCCACTCTTCACTTGGT 41661 >seq58 Length=350062 Score = 91.5 bits (100), Expect = 6e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||| | || || |||| || || |||||||| || || ||||| || Sbjct 20758 AATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTAA 20817 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||| || ||| | ||| || || || |||||||| ||||||||||| || Sbjct 20818 TGACACCATCGAGGCTGTCAAAAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCA 20877 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| || ||| | || ||||| || || ||||| | || | | || || || Sbjct 20878 GCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTACAA 20937 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || ||||||| || Sbjct 20938 CATCCAGAAGGAGTCCACTATTCACTTGGT 20967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975715590157988