Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 244 8e-59 seq58 114 1e-19 seq18 102 6e-16 seq27 98.7 8e-15 seq31 95.1 9e-14 >seq1 Length=825974 Score = 244 bits (270), Expect = 8e-59 Identities = 941/1458 (65%), Gaps = 20/1458 (1%) Strand=Plus/Minus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 ||||| ||||| || |||| || || || ||||| || || || | || |||||| Sbjct 169641 TTAGTGATAGTGATCTTCTGAGACTTACCAGTAGATTTGTCGGCAGCGGAGACGTTAAGA 169582 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| || ||||| | ||| || || || || || ||||| || | | ||||| Sbjct 169581 ATACCGTTAGCATCGACATCGAAGGTAACCTCGATCTGAGGAGTACCACGGGGGGCAGGG 169522 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | || | || || | || ||||| ||| | || ||| Sbjct 169521 GGGATACCAGAAAGCTCGAACTTACCGAGGATGTTGTTATCACGAGTAAGAGGACGCTCA 169462 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||||| | ||||| || ||| || || || | | ||| | || | ||| Sbjct 169461 CCCTCGAAGACCTGGATCAAGACACCAGGCTGGTTGTCAGCAGCAGTAGAGAAGA-TCTC 169403 Query 517454 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 || || || ||||| || ||||||| |||| ||||| | ||||| || Sbjct 169402 AGACTTCTTGGTGGGAATAGTGCTGTTTCTGGGGATAAGCTTGGTGAACTGGCCACCAGC 169343 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 517572 || || | ||| | ||| | ||||| |||||| | || | | | ||| || || Sbjct 169342 GGTCTCAATACCCAAAGACAAAGGAGCGACATCGAGAAGCAACAAGTCCTGA-GTCTTGG 169284 Query 517573 ATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 517631 | || | | |||| ||| ||||| || || | ||| ||||| || ||||| || |||| Sbjct 169283 AAGAGGTGTCACCAGTAAGGATAGCAGCCTGGACAGCGGCACCGTAAGCAACGGCCTCAT 169224 Query 517632 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTA 517691 |||| || | || || | | |||||| ||| || | |||| || | ||| | Sbjct 169223 CAGGGTTGATAGAACGGTTCAACTCCTTACCAGAGAAGAAGTCAGAAACGAGCT-TCTGA 169165 Query 517692 -CCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 517750 |||| || ||||||| || || ||||| | ||||| || | || | || || Sbjct 169164 ACCTTGGGGATACGAGTAGAACCACCAACAAGGACAATCTCGTTAACATCAGACTTGGAG 169105 Query 517751 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAA 517810 | || | |||| ||||| || ||||| || | | | | || | || Sbjct 169104 ACCTTAGCATCCTTCAAAACCTTCTCAACAGGGGCCATGGTAGAACGGAAGAGATCCTGG 169045 Query 517811 CAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAA 517869 || || || ||||| || | ||| | || | || || ||||| || ||| | | Sbjct 169044 CAGAGCTCCTCGAAACGGGCACGAGTGATAGA-AGTGTAGAAGTCAATACCCTCGTAAAG 168986 Query 517870 AGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACA 517929 ||| |||| ||||| | || ||||| |||||||| || ||||| |||||||| || || Sbjct 168985 AGAGTCAATCTCAATAGGGGTCTGAGTAGAAGAAGAGAGGGCACGCTTAGCACGCTCGCA 168926 Query 517930 TGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTT 517987 || || || || | || | || |||| || | | | || | || || ||| Sbjct 168925 AGCGGTTCTAAGACGACGAAGAGCAC--GCTGGTTACCAGTGATGTCCTTCTTGTACTTT 168868 Query 517988 CTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAAT 518047 |||||||| || | | | | | || || || ||||| ||||| ||||| ||||| Sbjct 168867 CTCTTGAACTCCTGAGCGAAGTGGTTAACGAGGCGGTTATCGAAATCCTCACCACCCAAG 168808 Query 518048 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTT 518107 | ||||| || | || || | || | ||| | || || |||| |||||||| Sbjct 168807 TGAGTATCACCAGCAGTGGCCTTGACCTCGAAGATACCGTCATCAATGCTCAAAAGAGAG 168748 Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG--T 518165 ||||| ||| |||||||||| ||| || ||||| || || | || || | | Sbjct 168747 ACATCGAAGGTACCACCACCCAAATCGAAGATAAGAACGTTG--TGCTCACCCTGGCCCT 168690 Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225 | || |||||||| || |||| |||||||| || || ||||| ||||| | | ||||| Sbjct 168689 TCTTGTCAAGACCGTAGGCAATGGCAGCAGCGGTAGGCTCATTGATAATACGAAGAACAT 168630 Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285 ||||||||||||| | || ||||| || || || || | || || ||||| || || | Sbjct 168629 TAAGACCAGCAATAGTACCGGCATCCTTGGTAGCCTGACGCTGGGAGTCGTTGAAGTAAG 168570 Query 518286 CAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCT-TGCCGTTTGT 518344 |||| |||||||||||||| | | || | ||| | | ||| || || || | Sbjct 168569 CAGGGACAGTAATAACGGCCTGATCAACCTTACCACCGAGGT-AGCCCTCAGCAGTCTCC 168511 Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTT 518404 ||||| || | | || ||| || || || | || || | | ||||| ||| Sbjct 168510 TTCATCTTGGTGAGAACCATGGAAGAGATCTCCTCAGGAGTGAAAGTCTTGGTCTCACCC 168451 Query 518405 TGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTAT 518464 | ||| || |||| || ||||| | | |||||| || || || | | Sbjct 168450 TTGTATTCAACCTCAATGACGGGCTTATTGCTCTTGTCAATAACCTTGAAAGGGAAATGC 168391 Query 518465 TTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523 || ||||| | | | || || |||| | | | ||||| | || || ||||| Sbjct 168390 TTAATATC-GTTCTGAGTCTCAGGATCATCCATCTTACGGCCAATAAGACGCTTGGCATC 168332 Query 518524 AAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 518583 || | ||||| | || || || ||||| |||| ||||| ||||| ||||| ||| | Sbjct 168331 GAAGACGGTATTAGAAGGGTTCATGGCAGCCTGATTCTTGGCGGCATCACCAATAAGACG 168272 Query 518584 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 518643 || || || || || | ||| | || ||||| || || ||||| ||||| || ||||| Sbjct 168271 CTCAGTGTCAGTGAAGGCAACGAACGAAGGAGTAGTACGGTTACCCTGATCGTTGGCAAT 168212 Query 518644 AATTTCAACTTTACCATT 518661 |||||||||| | |||| Sbjct 168211 AATTTCAACTCTGTCATT 168194 >seq58 Length=350062 Score = 114 bits (126), Expect = 1e-19 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGA--TTAATTGCAGCTTGATAT 518560 |||||| | || || ||||||||| ||||| || | ||| ||||| |||| Sbjct 55391 ACCAATGATACGCTTGATATCAAAAATGGTATT--TTCAACGTTAGAGGCAGCCTGATTC 55448 Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620 || || ||||| |||| || | |||| || | || | ||| || || ||||| | Sbjct 55449 TTAGCAGCATCACCAACCAAACGTTCGCCATCCTTGAAAGCAACGTAAGAAGGAGTGATA 55508 Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 || ||||| ||||| || |||| |||||||||| | |||| ||| |||||||||||| Sbjct 55509 CGGTTACCCTGATCGTTGGCAAGAATTTCAACTCTGCCATGCTGCATAACACCTACACAA 55568 Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAATAGCAATT 518716 | ||||| |||||||||||||||||| ||||| Sbjct 55569 GAGTATGTTGTACCTAAATCAATACCAATAACAATT 55604 >seq18 Length=219984 Score = 102 bits (112), Expect = 6e-16 Identities = 412/639 (64%), Gaps = 19/639 (3%) Strand=Plus/Minus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 |||| ||||| | ||| ||||| | |||| || | ||||| | || | ||| | | Sbjct 11386 TATCGAAATCCTGACCACCCAAGTGGGTATCACCAGCAGTAGCCTTAACATTGAAGACAC 11327 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 || | | | ||| | |||| ||||| || |||||||||| ||| ||||| || | Sbjct 11326 CACCCTGGATAGAGAGCAGAGAGACATCGAAAGTACCACCACCCAAATCGAAAATGAGAA 11267 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCA---AGACCATACGCAAAAGCAGCAGCAGTTG 518201 | | | | || | ||| || | || ||||| || |||| ||||||||| || | Sbjct 11266 CGTGCTTCTCCTCGTCAGTCTTACCAGCACCGAGACCGTAAGCAATAGCAGCAGCGGTAG 11207 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | || || || || | | ||| ||||||||||| || || ||||| ||||| || | Sbjct 11206 GCTCGTTGATGATACGAAGAACGTTAAGACCAGCGATGGAACCAGCATCCTTAGTAGCCT 11147 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA--CTTCTTT 518319 | | || || ||||| || || ||||| ||||| || || || | || | |||| | Sbjct 11146 GACGCTGGGAGTCGTTGAAGTAGGCAGGGACAGTGATGACAGCCT-TGTCAACCTTC-TG 11089 Query 518320 ACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC 518379 ||| | || || ||| ||||||||| || | ||| | || |||| | Sbjct 11088 GGCAAGCTTGGCCTCAGCGATTTCCTTCATTTTAACCAAGACCATGGCAGAGATTTCCTG 11029 Query 518380 TGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACC--- 518436 ||||| | ||| | || || | || || || | |||| ||||| Sbjct 11028 GGGGGAGAAAGACTTAGTCTCGTTAAGGTACTGGACCTC-GATCATGG--GGTTACCGTT 10972 Query 518437 AACATTAATAACTTTAAATGGCCAGTATTTCATAT-CTGATTGAACACTTTGG--TCATT 518493 | |||||| || || |||||| || || | ||| | | || |||| || | Sbjct 10971 GTGGTCAATAACCTTGAAAGGCCAGCTCTTGATGTCCTGCTGG---ACGTTGGCATCGTC 10915 Query 518494 AAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGC 518553 ||| | ||||| | || || ||||| |||| ||| ||| || |||| ||||| Sbjct 10914 GAAACGACGGCCAATGAGACGCTTAGCATCGAAAACAGTGTTGCGGGGGTTAAGAGCAGC 10855 Query 518554 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGG 518613 |||| || || ||||| ||||| ||| | || | || || || | |||| | || || Sbjct 10854 CTGATTCTTAGCAGCATCACCAATAAGACGCTCCTTATCAGTGAAAGCAACAAAGGAAGG 10795 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAAC 518652 ||| ||||||||||| ||||| || || || || || Sbjct 10794 AGTCACACGATTACCTTGCTCATTAGCGATGATCTCGAC 10756 >seq27 Length=172996 Score = 98.7 bits (108), Expect = 8e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || |||||||| || || ||||||||||| || || || |||| || ||||||||| || Sbjct 105547 TTCTCAAGACCGTAAGCCAAAGCAGCAGCGGTGGGCTCGTTAACAACTCTCAAAACGTTC 105488 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| |||| || ||||| || || ||||| | || ||||| || || || || Sbjct 105487 AAACCGACAATCTGGCCAGCATCCTTGGTTGCTTGACGCTGAGAATCATTGAAGTAAGCG 105428 Query 518288 GGAACAGTAATAACGGCAT 518306 || ||||||| |||||||| Sbjct 105427 GGGACAGTAACAACGGCAT 105409 >seq31 Length=139062 Score = 95.1 bits (104), Expect = 9e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||||||||||||| | | |||||||||||||| || |||||| || | ||| ||| Sbjct 118813 GGTAAAGAAGGTCGTTTGCGTGGAAATTTGATGGGCAAGCGTGTCAATTTCAGTGCTCGT 118754 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCC 668964 |||||||| || ||| || ||| ||| |||| || | ||||||||||| Sbjct 118753 ACAGTTATCACCGGTGACCCTAATCTTGATCTCGATCAGGTTGGTGTTCC 118704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780816891814366