Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 2e-19
>seq2
Length=253157
Score = 111 bits (122), Expect = 2e-19
Identities = 181/259 (70%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827
|| || ||||| | |||||||||| |||||||||||||||| || || || | |
Sbjct 229909 CAGAGATTTGGAGTCCCTATGGGATTCGGAGGTCCTCATGCTGGTTTTTTCGCCGTTAAA 229850
Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGTGAAG 153885
|| | | ||| |||| || || || |||||| | || || || | ||||| |
Sbjct 229849 GATGAATTTAAACGAAAAATTCCAGGTAGAATTATCGGC--GTGAGCAAGGATAGATTGG 229792
Query 153886 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAG 153945
|| || || |||||| | || ||||| ||||||||||||||||| || ||||| ||||
Sbjct 229791 GTGATCCTGCCTACAGACTTGCTCTACAAACTAGAGAGCAGCATATTAGAAGAGATAAAG 229732
Query 153946 CAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAG 154005
| || || || || || || || ||||| | || ||||| |||| | ||||| |
Sbjct 229731 CTACTTCGAATATTTGTACTGCGCAAGCACTTTTAGCCAATATCTCTGCTATGTATGCGG 229672
Query 154006 CATATCATGGTGCAGATGG 154024
|| |||||| | | |||
Sbjct 229671 TTTACCATGGTTCGGCTGG 229653
Score = 105 bits (116), Expect = 8e-18
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 153216 GGATACTATGGAACCATTACACCCCCA-GTCATACAGCGAAACGTTCTTGAGAATCCTAG 153274
|| ||||||||||| || || || | ||||| ||||||| | |||||||||||||
Sbjct 230452 GGTTACTATGGAACGAT-ACTTCCAAACGTCATTTTGCGAAACTTGCTTGAGAATCCTAA 230394
Query 153275 TTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTT 153334
||||| || ||| ||||| |||||| | || |||||||| || || | || | ||
Sbjct 230393 CTGGTATACCAGTTATACTCCTTATCAACCAGAAATATCTCAAGGTAGGCTTGAGTCATT 230334
Query 153335 ATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCT 153394
| |||||| ||||||| | | || || || || || | || || ||||| || |
Sbjct 230333 ACTCAATTTCCAAACGATGGTAACTGATCTAACTGGTATGGATATCGCCAACGCTTCATT 230274
Query 153395 ATTAGATGAAGCAACTGCAGCAGCA-GAAGCAATGCTATTA 153434
| | ||||||||||| || || ||| ||||| ||| | |||
Sbjct 230273 ACTTGATGAAGCAACAGCTGC-GCAGGAAGCTATGGTTTTA 230234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579211996342240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |