Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2 123 3e-23 >seq2 Length=253157 Score = 123 bits (136), Expect = 3e-23 Identities = 184/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 || || ||||| | |||||||||| ||||||||||||||||| || || || | | Sbjct 229909 CAGAGATTTGGAGTCCCTATGGGATTCGGAGGTCCTCATGCTGGTTTTTTCGCCGTTAAA 229850 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGCGAAG 158560 || | | ||| |||| || || || |||||| | || || || | ||||| | Sbjct 229849 GATGAATTTAAACGAAAAATTCCAGGTAGAATTATCGGC--GTGAGCAAGGATAGATTGG 229792 Query 158561 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAG 158620 || || || |||||| | || ||||| ||||||||||||||||| |||||||| |||| Sbjct 229791 GTGATCCTGCCTACAGACTTGCTCTACAAACTAGAGAGCAGCATATTAGAAGAGATAAAG 229732 Query 158621 CAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAG 158680 | || || || || || || |||||||| | || ||||| |||| | ||||| | Sbjct 229731 CTACTTCGAATATTTGTACTGCGCAAGCACTTTTAGCCAATATCTCTGCTATGTATGCGG 229672 Query 158681 CATATCATGGTGCAGATGG 158699 || |||||| | | ||| Sbjct 229671 TTTACCATGGTTCGGCTGG 229653 Score = 107 bits (118), Expect = 2e-18 Identities = 162/223 (73%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 157891 GGATACTATGGAACCATCACACCCCCA-GTCATACAGCGAAACGTTCTTGAGAATCCTAG 157949 || ||||||||||| || || || | ||||| ||||||| | ||||||||||||| Sbjct 230452 GGTTACTATGGAACGAT-ACTTCCAAACGTCATTTTGCGAAACTTGCTTGAGAATCCTAA 230394 Query 157950 TTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTT 158009 ||||| || ||| ||||| |||||| | || |||||||| || || | || | || Sbjct 230393 CTGGTATACCAGTTATACTCCTTATCAACCAGAAATATCTCAAGGTAGGCTTGAGTCATT 230334 Query 158010 ATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATA--GCAAACGCATCT 158067 | |||||| ||||||| | | || || || || || || |||| || ||||| || Sbjct 230333 ACTCAATTTCCAAACGATGGTAACTGATCTAACTGG--TATGGATATCGCCAACGCTTCA 230276 Query 158068 CTATTAGATGAAGCAACTGCAGCAGCA-GAAGCAATGCTGTTA 158109 || | ||||||||||| || || ||| ||||| ||| | ||| Sbjct 230275 TTACTTGATGAAGCAACAGCTGC-GCAGGAAGCTATGGTTTTA 230234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050384078960