Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq58 123 2e-23 seq29 118 7e-22 seq47 87.8 1e-12 >seq58 Length=350062 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||||||||| ||| || ||||| ||||| ||||| |||||| | || |||| || Sbjct 20967 ACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCG 20908 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || || || || | || |||||||| | || | || ||||||||||| Sbjct 20907 AGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 20848 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | | || | ||| | |||||| |||| ||| || || ||| Sbjct 20847 ATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTT 20788 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985 ||||| | ||||| | || |||||||| ||| Sbjct 20787 CCCGTCAACGTCTTTATGAAAATCTGCATTTTC 20755 >seq29 Length=154453 Score = 118 bits (130), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| |||||||| ||||| ||||| || ||| | || |||| || Sbjct 41660 AACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTC 41719 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||| || || || || || ||||| ||||| | || | || ||||| || || Sbjct 41720 AAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACT 41779 Query 34892 AATCTT-CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||| || || ||| |||| | || | ||| || ||||| |||| ||| || || | Sbjct 41780 AATTTTGCTCTTT-ACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCT 41838 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||| || |||||||| | || |||||||| || Sbjct 41839 TTCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 41872 >seq47 Length=387992 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | ||| || ||||| |||||||| || ||||| | || | || || Sbjct 346212 AACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTC 346271 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || || || |||||||| | || | || ||||||||||| Sbjct 346272 AAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCT 346331 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| || || | | | || | ||| | ||| || || | || || || || Sbjct 346332 GATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTT 346391 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| || | ||||| | |||||||||||| || Sbjct 346392 TCCGGTCAAGGTCTTGATAAAGATCTGCATGTT 346424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633160831608