Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq58 123 2e-23
seq29 118 7e-22
seq47 87.8 1e-12
>seq58
Length=350062
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
||||||||||| ||| || ||||| ||||| ||||| |||||| | || |||| ||
Sbjct 20967 ACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCG 20908
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || || || || | || |||||||| | || | || |||||||||||
Sbjct 20907 AGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 20848
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | | || | ||| | |||||| |||| ||| || || |||
Sbjct 20847 ATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTT 20788
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985
||||| | ||||| | || |||||||| |||
Sbjct 20787 CCCGTCAACGTCTTTATGAAAATCTGCATTTTC 20755
>seq29
Length=154453
Score = 118 bits (130), Expect = 7e-22
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||||| ||| |||||||| ||||| ||||| || ||| | || |||| ||
Sbjct 41660 AACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTC 41719
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||||| || || || || || ||||| ||||| | || | || ||||| || ||
Sbjct 41720 AAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACT 41779
Query 34892 AATCTT-CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||| || || ||| |||| | || | ||| || ||||| |||| ||| || || |
Sbjct 41780 AATTTTGCTCTTT-ACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCT 41838
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|||| || |||||||| | || |||||||| ||
Sbjct 41839 TTCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 41872
>seq47
Length=387992
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
|||||| || | ||| || ||||| |||||||| || ||||| | || | || ||
Sbjct 346212 AACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTC 346271
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
||||| || || || || || || || |||||||| | || | || |||||||||||
Sbjct 346272 AAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCT 346331
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||| || || | | | || | ||| | ||| || || | || || || ||
Sbjct 346332 GATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTT 346391
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
||| || | ||||| | |||||||||||| ||
Sbjct 346392 TCCGGTCAAGGTCTTGATAAAGATCTGCATGTT 346424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633160831608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |