Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 >seq2 Length=253157 Score = 138 bits (152), Expect = 1e-27 Identities = 187/259 (72%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 ||| | | |||||| || | ||||| | |||| ||||| || | |||||||| || Sbjct 229653 CCAGCCGAACCATGGTAAACCGCATACATAGCAGAGATATTGGCTAAAAGTGCTTGCGCA 229712 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || || || || || ||||| |||||||||||||||||||||||||||||||| || Sbjct 229713 GTACAAATATTCGAAGTAGCTTTATCTCTTCTAATATGCTGCTCTCTAGTTTGTAGAGCA 229772 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCC--ACTGACTGACCTACAATTCTGCCAGGTA 139440 | |||||| ||||||| || || ||| || || || | |||||| || || | Sbjct 229773 AGTCTGTAGGCAGGATCACCCAATCTATCCTTGCTCAC--GCCGATAATTCTACCTGGAA 229830 Query 139441 TCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCA 139500 | |||| ||| | | ||| | || || || ||||||||||||||||| |||||| Sbjct 229831 TTTTTCGTTTAAATTCATCTTTAACGGCGAAAAAACCAGCATGAGGACCTCCGAATCCCA 229890 Query 139501 TAGGAATACCAAACCTTTG 139519 |||| | ||||| || || Sbjct 229891 TAGGGACTCCAAATCTCTG 229909 Score = 100 bits (110), Expect = 3e-16 Identities = 158/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 139853 TAACAGCATTGCCTC-TGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTG 139911 ||| | ||| || || ||| || || ||||||||||| | || || ||||| || || Sbjct 230234 TAAAACCATAGCTTCCTGC-GCAGCTGTTGCTTCATCAAGTAATGAAGCGTTGGCGATAT 230292 Query 139912 GTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCT 139971 | || || || || || | | ||||||| |||||| ||| | || | || || | Sbjct 230293 CCATACCAGTTAGATCAGTTACCATCGTTTGGAAATTGAGTAATGACTCAAGCCTACCTT 230352 Query 139972 GAGATATCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGT 140031 ||||||| || | |||||| ||||| ||| || ||||| ||||||||||||| | || Sbjct 230353 GAGATATTTCTGGTTGATAAGGAGTATAACTGGTATACCAGTTAGGATTCTCAAGCAAGT 230412 Query 140032 TTCGCTGTATGAC-TGGGGGTGTAATGGTTCCATAGTATCC 140071 ||||| ||||| | || || || ||||||||||| || Sbjct 230413 TTCGCAAAATGACGTTTGGAAGT-ATCGTTCCATAGTAACC 230452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997596639720