Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq17 219 1e-51 seq31 113 1e-19 seq36 102 2e-16 seq58 98.7 3e-15 seq18 84.2 6e-11 >seq17 Length=239553 Score = 219 bits (242), Expect = 1e-51 Identities = 631/961 (66%), Gaps = 25/961 (3%) Strand=Plus/Plus Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAAT 155641 ||| ||| || |||||||||||||| ||||| |||| | | | ||| || || || Sbjct 97013 AGAGCAACTGAAGCCAGATTACATACAGCAGTTTCCTCAGGACTAGA-GTACTCAACGAT 97071 Query 155642 CTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTT 155701 |||||||||| |||||||||||||| || || | ||| ||| ||| || | ||| Sbjct 97072 TTCACAGCACAAATTAGAACTCTTGATAGTACCAAGATTACGCTGATTACTCTTGCGGTT 97131 Query 155702 ACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTT 155761 | |||||| || || ||| | || | |||||||| | || || |||| ||| Sbjct 97132 AGCCTGATCCTTATAAAGCATGAAAGGATTACCTGTCTCAGTTTGAGCTTCCAAAATGGC 97191 Query 155762 TAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATAT-TTCA 155820 ||| || | | || |||| | || | | |||| || |||| |||| Sbjct 97192 GTACCATAGCTTCTGAGC-----TTTGATGGTACGA-CGACCTTT--ACCCATACGTTCA 97243 Query 155821 TA-------TACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTA 155873 || || ||| | | | || ||||| ||| |||| || |||||||| | Sbjct 97244 TAACGTGTGTAAAGCTCTTCGAATTCATCACCATAAACATCAGCAAGACCAGGGCATTCG 97303 Query 155874 TCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTC 155933 | ||| || | || | ||| | || | | || | || ||| |||| ||| Sbjct 97304 TTGGGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTTCATGAATAAGTCAGGA 97363 Query 155934 GCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT--CATCGCCGTGATTCTTCC 155991 ||||| ||| | || || || | || |||| || | | | ||| ||||| | Sbjct 97364 ATCCAAAGAGCCAAAAACAGATCACGGGCACG-GACTTCTTCCTTACCAGTG-TTCTTAC 97421 Query 155992 GTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTAC 156051 | || || | ||| || || |||| ||| || || ||||| ||||| ||| || Sbjct 97422 GAAGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATAAATAGCGAAAGCAC 97481 Query 156052 CATTCC---TCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCA 156108 | | | |||||||||||||| ||||| |||||||| ||||||||||||| |||| Sbjct 97482 CTGGACGTTTGTTGCCACCCTGATCAACATAACGAGCAGTGTTATTGAAGACACGAAGCA 97541 Query 156109 TAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAA 156168 | |||| |||||| ||||| || || || || ||| || | ||||||| | || | Sbjct 97542 TTGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGAACCAGTGGCACGGA 97601 Query 156169 CATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTA 156228 ||| |||| || || ||||||||||| | |||||||||| |||| || |||| Sbjct 97602 TATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAGAGCACAAGATTTTA 97661 Query 156229 CAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTA 156288 |||| |||| || || ||||| || |||| ||| | | || | |||||||| | Sbjct 97662 GGGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAGGAAACACGAACTCA 97721 Query 156289 ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTAT 156348 |||||||| || || || || ||| | | || || | || || | || ||||| | Sbjct 97722 TTTGAGGTCTGGGAGTACCGGCATTGTACAAAGTGGGAGAAGCGTGGGTGAAGTACTTGT 97781 Query 156349 TAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAG 156408 | ||||| | |||||||| || | | ||| | ||| | || || |||| |||| Sbjct 97782 TGGACATCAAGTCGTATGTTTCGATGACCTTAGGGATGTTAAAACCATGGATACCAATAG 97841 Query 156409 AGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGT 156468 || ||||| ||||||||| ||||| || || || |||| || | ||| | || Sbjct 97842 CAACTCTCATGATCATATGCTGTGGACGTTCGTGAACAACACCATTAAGTTTCAGCAAGT 97901 Query 156469 ATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAA 156528 | | ||| | || ||||| || ||||| |||| | |||||||| | |||||| | Sbjct 97902 AAGAGCGCTGCAATGTTTTGAAACCGAAGTAATTGTATTTGAAATCACGCTGGTAATCGA 97961 Query 156529 T 156529 | Sbjct 97962 T 97962 >seq31 Length=139062 Score = 113 bits (124), Expect = 1e-19 Identities = 210/306 (69%), Gaps = 2/306 (1%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 || |||| | ||| | ||||| || ||||||||||| ||| || |||||| || || Sbjct 117264 TCCTCCAAAGCCTTTACCAAACGTCGTTGAATATAACCTGTTTCAGCTGTTTTGACGGCA 117323 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 ||||| || | ||| ||||||| |||| ||||||||||| | |||| || ||| Sbjct 117324 GTATCGATCAAACCTTCACGACCTGCCATTGCATGGAAGAAGAATTCTTGAGGGGTTAGT 117383 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTG-GT 302750 || | || | |||| | || || || || | ||| || || | || | | | || Sbjct 117384 CCTCTAAGATAGGAATTTTCGACAAATCCCTTTGACTCCGGGGAGTAATC-ATCACGCGT 117442 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || ||||| || |||| || |||| || | ||||||||| || ||||| |||| Sbjct 117443 GAAATGAGGCAGAGTTCTGTCAACAAAGCCATAAGCGATACGCTTACCTTCAACAATCTG 117502 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGCATT 302870 ||| || | || | ||||||||| || || | | | ||||| || |||| | | Sbjct 117503 CTGACCAACACAGGCTGACATCTGCGAGATGTTAATAAAAGAACCCTTTGATCCAGAACT 117562 Query 302871 TACCAT 302876 |||||| Sbjct 117563 TACCAT 117568 >seq36 Length=461309 Score = 102 bits (112), Expect = 2e-16 Identities = 231/342 (68%), Gaps = 4/342 (1%) Strand=Plus/Plus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 |||| |||||| || || || || || | | |||||| | || ||| || |||| Sbjct 377918 CCAATAGCATCGATCTCATCTATAAACACAATCGACGGAGCCTCTTTTCTGGCGGTTGCG 377977 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | || | || | || || || | ||| ||| ||||||||||||| || ||| | Sbjct 377978 AAAAGATCGCGAACCCTAGAGGCACCGACACCTACAAACATTTCTACAAACTCCGAACCA 378037 Query 289150 GATACT-TGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || |||| || | || |||||| || ||| || | || || | ||||| Sbjct 378038 CTAACGCTGAAAAAAGGC-ACGCCTGCTTCACCAGCTGTAGCTTTTGCAAGCATAGTCTT 378096 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGACT 289267 |||||||||||| || ||| ||| | | | || ||| | |||||| ||||| || Sbjct 378097 ACCTGTTCCAGGCGGGCCCGATAAGATAGCACCTCGTGGGATTTTTGCACCCAG-TTTCT 378155 Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327 ||| || | ||| ||| ||||| ||||||| ||| || |||| ||| ||||||| Sbjct 378156 CATACTTTTGAGGTACCTTCAAAAACTCTACAAACTCCATAATTTCAGCTTTGGCCTCAT 378215 Query 289328 CACATCCTGCTACATCAGCAAAAGTAATATTAATATCGTTCT 289369 || ||| || || || ||||| |||| |||| || |||| Sbjct 378216 CAGCTCCAGCGACGTCGGCAAACTTAATTTTAACGTCTTTCT 378257 >seq58 Length=350062 Score = 98.7 bits (108), Expect = 3e-15 Identities = 334/511 (65%), Gaps = 16/511 (3%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | ||||||||||||||||||||||| ||||| || | ||||||||| | Sbjct 321617 GCACCGTGCGCGATCATACAATCACGCTCCATTTCTCCGAATCGCAAACCACCATCTCTC 321676 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 | | ||| ||| | ||||| | ||| || | || ||||| | ||| ||| Sbjct 321677 GAACGACCTTCGACCGGCTGTCTAGTAAGGATCTGCACCGGACCACGAGCACGGGCATGG 321736 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTC 251664 |||||| | ||||||||| | || | ||||||| | | || |||| ||| | || Sbjct 321737 ATCTTATCGTCTACCATATGTCTCAGTCTCTGGTAGTACGTAGGTCCGAAGAA-ACACTG 321795 Query 251665 G--AAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCAT 251722 | || | |||| ||||| || |||| ||||| || || ||| | | Sbjct 321796 GGCAACGAGCTTGC-GACCAGTGTGACCGTTGTACATGACCTCAAAGCCACGGCTCTGGT 321854 Query 251723 AACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGTGC 251782 ||||| | | ||||| | | || | || ||| | | | | | || ||| Sbjct 321855 AACCATGCTCACGTAGCAGTTTACTAACAGCATCAACGGTAACCTCGGTGAATGGCGTGG 321914 Query 251783 CGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTA-AAAG---TGTCTCTTTCAGT 251838 |||| || | | ||| || ||||| | || |||| ||| ||| Sbjct 321915 CGTCACCCTCCAAACC----AGAGAGTGCACTTACCTTAGAAAGCAAACACTCGATCAAA 321970 Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||||| |||||||| || ||||| || || ||||| || | || || || Sbjct 321971 TGGGCGACTGTCATACGTGAAGGGATAGCGTGTGGGTTGATAATTAGATCCGGAACAAGA 322030 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGT--TTCCAATAGTTCCCTTTT 251956 || || ||||||||||||||||||| | | | |||| | ||||| || ||||| | Sbjct 322031 CCCTCGGCAGTGAAGGGCATATCCTCAT-GGCGGT-ATGTAATACCAATGGTACCCTTCT 322088 Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | |||||||||||| ||||||||||||||| Sbjct 322089 GACCGTGACGAGAAGCGAACTTATCACCAAT 322119 >seq18 Length=219984 Score = 84.2 bits (92), Expect = 6e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 380959 CAGAATGTAAAAATCTGGAATGGTAATGGTAGTCGTGAGTTTTTAGATTCCCGTGGTCTA 381018 |||||| | | || ||| |||| ||||| ||||| || || | ||| | ||||| Sbjct 203756 CAGAATATCCATATTTGGGATGGCAATGGAAGTCGCGAATTCCTTGATAAAAGAGGTCTT 203815 Query 381019 ACCAATAACGAAGAAGATGACCTTGGTCCTATTTACGGATTTCAGTGGAGACATTTTAAC 381078 || |||| || | |||| | || ||| ||||||||||||||||| | || || Sbjct 203816 ACTTCTAACCGTGAGGGTGACTTGGGACCTGTTTACGGATTTCAGTGGCGTCACTTCGGT 203875 Query 381079 GCCGATTATGATAATTGTGATAGTGATTATACTGGTAAGGGTGTCGACCAG 381129 || |||||| |||||| |||||||||||| || ||| |||||||| Sbjct 203876 GCTGATTATCTCGGATGTGATGCTGATTATACTGGAAAAGGTATCGACCAG 203926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815506799407