Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq17 219 1e-51
seq31 113 1e-19
seq36 102 2e-16
seq58 98.7 3e-15
seq18 84.2 6e-11
>seq17
Length=239553
Score = 219 bits (242), Expect = 1e-51
Identities = 631/961 (66%), Gaps = 25/961 (3%)
Strand=Plus/Plus
Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAAT 155641
||| ||| || |||||||||||||| ||||| |||| | | | ||| || || ||
Sbjct 97013 AGAGCAACTGAAGCCAGATTACATACAGCAGTTTCCTCAGGACTAGA-GTACTCAACGAT 97071
Query 155642 CTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTT 155701
|||||||||| |||||||||||||| || || | ||| ||| ||| || | |||
Sbjct 97072 TTCACAGCACAAATTAGAACTCTTGATAGTACCAAGATTACGCTGATTACTCTTGCGGTT 97131
Query 155702 ACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTT 155761
| |||||| || || ||| | || | |||||||| | || || |||| |||
Sbjct 97132 AGCCTGATCCTTATAAAGCATGAAAGGATTACCTGTCTCAGTTTGAGCTTCCAAAATGGC 97191
Query 155762 TAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATAT-TTCA 155820
||| || | | || |||| | || | | |||| || |||| ||||
Sbjct 97192 GTACCATAGCTTCTGAGC-----TTTGATGGTACGA-CGACCTTT--ACCCATACGTTCA 97243
Query 155821 TA-------TACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTA 155873
|| || ||| | | | || ||||| ||| |||| || |||||||| |
Sbjct 97244 TAACGTGTGTAAAGCTCTTCGAATTCATCACCATAAACATCAGCAAGACCAGGGCATTCG 97303
Query 155874 TCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTC 155933
| ||| || | || | ||| | || | | || | || ||| |||| |||
Sbjct 97304 TTGGGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTTCATGAATAAGTCAGGA 97363
Query 155934 GCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT--CATCGCCGTGATTCTTCC 155991
||||| ||| | || || || | || |||| || | | | ||| ||||| |
Sbjct 97364 ATCCAAAGAGCCAAAAACAGATCACGGGCACG-GACTTCTTCCTTACCAGTG-TTCTTAC 97421
Query 155992 GTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTAC 156051
| || || | ||| || || |||| ||| || || ||||| ||||| ||| ||
Sbjct 97422 GAAGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATAAATAGCGAAAGCAC 97481
Query 156052 CATTCC---TCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCA 156108
| | | |||||||||||||| ||||| |||||||| ||||||||||||| ||||
Sbjct 97482 CTGGACGTTTGTTGCCACCCTGATCAACATAACGAGCAGTGTTATTGAAGACACGAAGCA 97541
Query 156109 TAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAA 156168
| |||| |||||| ||||| || || || || ||| || | ||||||| | || |
Sbjct 97542 TTGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGAACCAGTGGCACGGA 97601
Query 156169 CATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTA 156228
||| |||| || || ||||||||||| | |||||||||| |||| || ||||
Sbjct 97602 TATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAGAGCACAAGATTTTA 97661
Query 156229 CAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTA 156288
|||| |||| || || ||||| || |||| ||| | | || | |||||||| |
Sbjct 97662 GGGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAGGAAACACGAACTCA 97721
Query 156289 ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTAT 156348
|||||||| || || || || ||| | | || || | || || | || ||||| |
Sbjct 97722 TTTGAGGTCTGGGAGTACCGGCATTGTACAAAGTGGGAGAAGCGTGGGTGAAGTACTTGT 97781
Query 156349 TAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAG 156408
| ||||| | |||||||| || | | ||| | ||| | || || |||| ||||
Sbjct 97782 TGGACATCAAGTCGTATGTTTCGATGACCTTAGGGATGTTAAAACCATGGATACCAATAG 97841
Query 156409 AGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGT 156468
|| ||||| ||||||||| ||||| || || || |||| || | ||| | ||
Sbjct 97842 CAACTCTCATGATCATATGCTGTGGACGTTCGTGAACAACACCATTAAGTTTCAGCAAGT 97901
Query 156469 ATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAA 156528
| | ||| | || ||||| || ||||| |||| | |||||||| | |||||| |
Sbjct 97902 AAGAGCGCTGCAATGTTTTGAAACCGAAGTAATTGTATTTGAAATCACGCTGGTAATCGA 97961
Query 156529 T 156529
|
Sbjct 97962 T 97962
>seq31
Length=139062
Score = 113 bits (124), Expect = 1e-19
Identities = 210/306 (69%), Gaps = 2/306 (1%)
Strand=Plus/Plus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
|| |||| | ||| | ||||| || ||||||||||| ||| || |||||| || ||
Sbjct 117264 TCCTCCAAAGCCTTTACCAAACGTCGTTGAATATAACCTGTTTCAGCTGTTTTGACGGCA 117323
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691
||||| || | ||| ||||||| |||| ||||||||||| | |||| || |||
Sbjct 117324 GTATCGATCAAACCTTCACGACCTGCCATTGCATGGAAGAAGAATTCTTGAGGGGTTAGT 117383
Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTG-GT 302750
|| | || | |||| | || || || || | ||| || || | || | | | ||
Sbjct 117384 CCTCTAAGATAGGAATTTTCGACAAATCCCTTTGACTCCGGGGAGTAATC-ATCACGCGT 117442
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
|| || ||||| || |||| || |||| || | ||||||||| || ||||| ||||
Sbjct 117443 GAAATGAGGCAGAGTTCTGTCAACAAAGCCATAAGCGATACGCTTACCTTCAACAATCTG 117502
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGCATT 302870
||| || | || | ||||||||| || || | | | ||||| || |||| | |
Sbjct 117503 CTGACCAACACAGGCTGACATCTGCGAGATGTTAATAAAAGAACCCTTTGATCCAGAACT 117562
Query 302871 TACCAT 302876
||||||
Sbjct 117563 TACCAT 117568
>seq36
Length=461309
Score = 102 bits (112), Expect = 2e-16
Identities = 231/342 (68%), Gaps = 4/342 (1%)
Strand=Plus/Plus
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|||| |||||| || || || || || | | |||||| | || ||| || ||||
Sbjct 377918 CCAATAGCATCGATCTCATCTATAAACACAATCGACGGAGCCTCTTTTCTGGCGGTTGCG 377977
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
|| | || | || | || || || | ||| ||| ||||||||||||| || ||| |
Sbjct 377978 AAAAGATCGCGAACCCTAGAGGCACCGACACCTACAAACATTTCTACAAACTCCGAACCA 378037
Query 289150 GATACT-TGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| |||| || | || |||||| || ||| || | || || | |||||
Sbjct 378038 CTAACGCTGAAAAAAGGC-ACGCCTGCTTCACCAGCTGTAGCTTTTGCAAGCATAGTCTT 378096
Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGACT 289267
|||||||||||| || ||| ||| | | | || ||| | |||||| ||||| ||
Sbjct 378097 ACCTGTTCCAGGCGGGCCCGATAAGATAGCACCTCGTGGGATTTTTGCACCCAG-TTTCT 378155
Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327
||| || | ||| ||| ||||| ||||||| ||| || |||| ||| |||||||
Sbjct 378156 CATACTTTTGAGGTACCTTCAAAAACTCTACAAACTCCATAATTTCAGCTTTGGCCTCAT 378215
Query 289328 CACATCCTGCTACATCAGCAAAAGTAATATTAATATCGTTCT 289369
|| ||| || || || ||||| |||| |||| || ||||
Sbjct 378216 CAGCTCCAGCGACGTCGGCAAACTTAATTTTAACGTCTTTCT 378257
>seq58
Length=350062
Score = 98.7 bits (108), Expect = 3e-15
Identities = 334/511 (65%), Gaps = 16/511 (3%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|||||||| | ||||||||||||||||||||||| ||||| || | ||||||||| |
Sbjct 321617 GCACCGTGCGCGATCATACAATCACGCTCCATTTCTCCGAATCGCAAACCACCATCTCTC 321676
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
| | ||| ||| | ||||| | ||| || | || ||||| | ||| |||
Sbjct 321677 GAACGACCTTCGACCGGCTGTCTAGTAAGGATCTGCACCGGACCACGAGCACGGGCATGG 321736
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTC 251664
|||||| | ||||||||| | || | ||||||| | | || |||| ||| | ||
Sbjct 321737 ATCTTATCGTCTACCATATGTCTCAGTCTCTGGTAGTACGTAGGTCCGAAGAA-ACACTG 321795
Query 251665 G--AAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCAT 251722
| || | |||| ||||| || |||| ||||| || || ||| | |
Sbjct 321796 GGCAACGAGCTTGC-GACCAGTGTGACCGTTGTACATGACCTCAAAGCCACGGCTCTGGT 321854
Query 251723 AACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGTGC 251782
||||| | | ||||| | | || | || ||| | | | | | || |||
Sbjct 321855 AACCATGCTCACGTAGCAGTTTACTAACAGCATCAACGGTAACCTCGGTGAATGGCGTGG 321914
Query 251783 CGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTA-AAAG---TGTCTCTTTCAGT 251838
|||| || | | ||| || ||||| | || |||| ||| |||
Sbjct 321915 CGTCACCCTCCAAACC----AGAGAGTGCACTTACCTTAGAAAGCAAACACTCGATCAAA 321970
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||||| |||||||| || ||||| || || ||||| || | || || ||
Sbjct 321971 TGGGCGACTGTCATACGTGAAGGGATAGCGTGTGGGTTGATAATTAGATCCGGAACAAGA 322030
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGT--TTCCAATAGTTCCCTTTT 251956
|| || ||||||||||||||||||| | | | |||| | ||||| || ||||| |
Sbjct 322031 CCCTCGGCAGTGAAGGGCATATCCTCAT-GGCGGT-ATGTAATACCAATGGTACCCTTCT 322088
Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987
| |||||||||||| |||||||||||||||
Sbjct 322089 GACCGTGACGAGAAGCGAACTTATCACCAAT 322119
>seq18
Length=219984
Score = 84.2 bits (92), Expect = 6e-11
Identities = 121/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 380959 CAGAATGTAAAAATCTGGAATGGTAATGGTAGTCGTGAGTTTTTAGATTCCCGTGGTCTA 381018
|||||| | | || ||| |||| ||||| ||||| || || | ||| | |||||
Sbjct 203756 CAGAATATCCATATTTGGGATGGCAATGGAAGTCGCGAATTCCTTGATAAAAGAGGTCTT 203815
Query 381019 ACCAATAACGAAGAAGATGACCTTGGTCCTATTTACGGATTTCAGTGGAGACATTTTAAC 381078
|| |||| || | |||| | || ||| ||||||||||||||||| | || ||
Sbjct 203816 ACTTCTAACCGTGAGGGTGACTTGGGACCTGTTTACGGATTTCAGTGGCGTCACTTCGGT 203875
Query 381079 GCCGATTATGATAATTGTGATAGTGATTATACTGGTAAGGGTGTCGACCAG 381129
|| |||||| |||||| |||||||||||| || ||| ||||||||
Sbjct 203876 GCTGATTATCTCGGATGTGATGCTGATTATACTGGAAAAGGTATCGACCAG 203926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471815506799407
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |