Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq58 113 4e-20 seq47 98.7 9e-16 >seq58 Length=350062 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || || || ||| | || || || |||||||| ||||| || || | | Sbjct 20759 ATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTAAT 20818 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||| ||||| ||||| || ||||| || || Sbjct 20819 GACACCATCGAGGCTGTCAAAAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAG 20878 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| || || |||||||| |||||| | | | | || || || ||| Sbjct 20879 CAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTACAAC 20938 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || | ||||||||| Sbjct 20939 ATCCAGAAGGAGTCCACTATTCACTTGGTG 20968 >seq47 Length=387992 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||||| || || | ||||| || ||||| || || ||||| || | | Sbjct 346421 ATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCTAAT 346362 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | ||| | || || |||||| ||||| ||||| || ||||| || || Sbjct 346361 GATACCATCGAAGCTGTGAAGAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAG 346302 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| ||||| | | | || || |||||| Sbjct 346301 CAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAAC 346242 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || || ||||| | || ||||| || || Sbjct 346241 ATCCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTTTGCGTGGTGG 346195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896975767080