Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq1 255 4e-62
seq58 114 1e-19
seq31 107 1e-17
seq27 98.7 7e-15
seq18 98.7 7e-15
>seq1
Length=825974
Score = 255 bits (282), Expect = 4e-62
Identities = 947/1461 (65%), Gaps = 26/1461 (2%)
Strand=Plus/Minus
Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440
||||| ||||| || |||| || || || ||||| || || || | || ||||||
Sbjct 169641 TTAGTGATAGTGATCTTCTGAGACTTACCAGTAGATTTGTCGGCAGCGGAGACGTTAAGA 169582
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
||||| || ||||| | ||| || || || || || ||||| || | | |||||
Sbjct 169581 ATACCGTTAGCATCGACATCGAAGGTAACCTCGATCTGAGGAGTACCACGGGGGGCAGGG 169522
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560
||||| || | | || | || || | || ||||| ||| | || |||
Sbjct 169521 GGGATACCAGAAAGCTCGAACTTACCGAGGATGTTGTTATCACGAGTAAGAGGACGCTCA 169462
Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620
|||||||| | ||||| || ||| || || || | | ||| | || | |||
Sbjct 169461 CCCTCGAAGACCTGGATCAAGACACCAGGCTGGTTGTCAGCAGCAGTAGAGAAGA-TCTC 169403
Query 281621 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679
|| || || ||||| || ||||||| |||| ||||| | ||||||||
Sbjct 169402 AGACTTCTTGGTGGGAATAGTGCTGTTTCTGGGGATAAGCTTGGTGAACTGGCCACCAGC 169343
Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 281739
|| || | ||| | ||| | ||||| |||||| | || | | | ||| || ||
Sbjct 169342 GGTCTCAATACCCAAAGACAAAGGAGCGACATCGAGAAGCAACAAGTCCTGA-GTCTTGG 169284
Query 281740 ATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 281798
| || | | |||| ||| ||||| || || | ||| ||||| || ||||| || ||||
Sbjct 169283 AAGAGGTGTCACCAGTAAGGATAGCAGCCTGGACAGCGGCACCGTAAGCAACGGCCTCAT 169224
Query 281799 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTA 281858
|||| || | || || | | |||||| ||| || | |||| || | ||| |
Sbjct 169223 CAGGGTTGATAGAACGGTTCAACTCCTTACCAGAGAAGAAGTCAGAAACGAGCT-TCTGA 169165
Query 281859 -CCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 281917
|||| || ||||||| || || ||||| | ||||| || | || | || ||
Sbjct 169164 ACCTTGGGGATACGAGTAGAACCACCAACAAGGACAATCTCGTTAACATCAGACTTGGAG 169105
Query 281918 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAA 281977
| || | |||| ||||| || ||||| || | | || | || | ||
Sbjct 169104 ACCTTAGCATCCTTCAAAACCTTCTCAACAGGGGCCATGGTAGAACGGAAGAGATCCTGG 169045
Query 281978 CAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAA 282036
|| || || ||||| || | ||| | || | || || ||||| || ||| | |
Sbjct 169044 CAGAGCTCCTCGAAACGGGCACGAGTGATAGA-AGTGTAGAAGTCAATACCCTCGTAAAG 168986
Query 282037 AGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACA 282096
||| |||| ||||| | || ||||| |||||||| || ||||| |||||||| || ||
Sbjct 168985 AGAGTCAATCTCAATAGGGGTCTGAGTAGAAGAAGAGAGGGCACGCTTAGCACGCTCGCA 168926
Query 282097 TGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTT 282154
|| || || || | || | || |||| || | | | || | || || |||
Sbjct 168925 AGCGGTTCTAAGACGACGAAGAGCAC--GCTGGTTACCAGTGATGTCCTTCTTGTACTTT 168868
Query 282155 CTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAAT 282214
|||||||| || | | | | | || || || ||||| ||||| ||||| |||||
Sbjct 168867 CTCTTGAACTCCTGAGCGAAGTGGTTAACGAGGCGGTTATCGAAATCCTCACCACCCAAG 168808
Query 282215 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTA 282274
| ||||| || | || || | || | ||| | || || |||| ||||||||
Sbjct 168807 TGAGTATCACCAGCAGTGGCCTTGACCTCGAAGATACCGTCATCAATGCTCAAAAGAGAG 168748
Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG--T 282332
||||| ||| |||||||||| ||| || ||||| || || | || || | |
Sbjct 168747 ACATCGAAGGTACCACCACCCAAATCGAAGATAAGAACGTTG--TGCTCACCCTGGCCCT 168690
Query 282333 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392
| || |||||||| || |||| |||||||| || || ||||| ||||| | | |||||
Sbjct 168689 TCTTGTCAAGACCGTAGGCAATGGCAGCAGCGGTAGGCTCATTGATAATACGAAGAACAT 168630
Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452
||||||||||||| | || ||||| || || || || | || || ||||| || || |
Sbjct 168629 TAAGACCAGCAATAGTACCGGCATCCTTGGTAGCCTGACGCTGGGAGTCGTTGAAGTAAG 168570
Query 282453 CAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA---ATATAAGCGCT-TGCTGTT 282508
|||| |||||||||||||| ||| | | | || ||| | | ||| || || ||
Sbjct 168569 CAGGGACAGTAATAACGGC--CTGAT-CAACCTTACCACCGAGGT-AGCCCTCAGCAGTC 168514
Query 282509 TGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCA 282568
| ||||| || | | || ||| || || || | || |||| | ||||| |||
Sbjct 168513 TCCTTCATCTTGGTGAGAACCATGGAAGAGATCTCCTCAGGAGTGAAAGTCTTGGTCTCA 168454
Query 282569 TTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAA 282628
| ||| || |||| || ||||| | | |||||| || || || ||
Sbjct 168453 CCCTTGTATTCAACCTCAATGACGGGCTTATTGCTCTTGTCAATAACCTTGAAAGGGAAA 168394
Query 282629 TATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGTTTTGC 282687
| || ||||| | | | || || |||| | | | ||||| | || || ||
Sbjct 168393 TGCTTAATATC-GTTCTGAGTCTCAGGATCATCCATCTTACGGCCAATAAGACGCTTGGC 168335
Query 282688 ATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAG 282747
||| || | ||||| | || || | ||||| |||| ||||| ||||| ||||| ||
Sbjct 168334 ATCGAAGACGGTATTAGAAGGGTTCATGGCAGCCTGATTCTTGGCGGCATCACCAATAAG 168275
Query 282748 ATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGC 282807
| | || || || || || | ||| | || ||||| || || ||||| ||||| || ||
Sbjct 168274 ACGCTCAGTGTCAGTGAAGGCAACGAACGAAGGAGTAGTACGGTTACCCTGATCGTTGGC 168215
Query 282808 AATAATTTCAACTTTACCATT 282828
||||||||||||| | ||||
Sbjct 168214 AATAATTTCAACTCTGTCATT 168194
>seq58
Length=350062
Score = 114 bits (126), Expect = 1e-19
Identities = 156/216 (72%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 282670 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGA--TTAACTGCAGCTTGATAT 282727
|||||| | || || ||||||||| ||||| || | ||| ||||| ||||
Sbjct 55391 ACCAATGATACGCTTGATATCAAAAATGGTATT--TTCAACGTTAGAGGCAGCCTGATTC 55448
Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787
|| || ||||| |||| || | |||| || | || | ||| || || ||||| |
Sbjct 55449 TTAGCAGCATCACCAACCAAACGTTCGCCATCCTTGAAAGCAACGTAAGAAGGAGTGATA 55508
Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847
|| ||||| ||||| || |||| |||||||||| | |||| ||| ||||||||||||
Sbjct 55509 CGGTTACCCTGATCGTTGGCAAGAATTTCAACTCTGCCATGCTGCATAACACCTACACAA 55568
Query 282848 CTAAAAGTTGTTCCTAAATCAATACCAATAGCAATT 282883
| ||||| |||||||||||||||||| |||||
Sbjct 55569 GAGTATGTTGTACCTAAATCAATACCAATAACAATT 55604
>seq31
Length=139062
Score = 107 bits (118), Expect = 1e-17
Identities = 111/143 (78%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341
|||| ||||||||||||||| | | |||||||||||||| ||||||||| || | |
Sbjct 118819 TTGAAGGGTAAAGAAGGTCGTTTGCGTGGAAATTTGATGGGCAAGCGTGTCAATTTCAGT 118760
Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTC 432401
|| ||||||||||| || ||| |||||| ||| |||| || | ||||||||||| |
Sbjct 118759 GCTCGTACAGTTATCACCGGTGACCCTAATCTTGATCTCGATCAGGTTGGTGTTCC-CAA 118701
Query 432402 AT-TATTGCGAAAAATCTTACTT 432423
|| ||||||| | |||| |||
Sbjct 118700 ATCTATTGCGCGTACTCTTTCTT 118678
>seq27
Length=172996
Score = 98.7 bits (108), Expect = 7e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394
|| |||||||| || || ||||||||||| || || || |||| || ||||||||| ||
Sbjct 105547 TTCTCAAGACCGTAAGCCAAAGCAGCAGCGGTGGGCTCGTTAACAACTCTCAAAACGTTC 105488
Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454
| ||| |||| || ||||| || || ||||| | || ||||| || || || ||
Sbjct 105487 AAACCGACAATCTGGCCAGCATCCTTGGTTGCTTGACGCTGAGAATCATTGAAGTAAGCG 105428
Query 282455 GGAACAGTAATAACGGCAT 282473
|| ||||||| ||||||||
Sbjct 105427 GGGACAGTAACAACGGCAT 105409
>seq18
Length=219984
Score = 98.7 bits (108), Expect = 7e-15
Identities = 192/283 (68%), Gaps = 3/283 (1%)
Strand=Plus/Minus
Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251
|||| ||||| | ||| ||||| | |||| || | ||||| | || | ||| | |
Sbjct 11386 TATCGAAATCCTGACCACCCAAGTGGGTATCACCAGCAGTAGCCTTAACATTGAAGACAC 11327
Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311
|| | | | ||| | |||| ||||| || |||||||||| ||| ||||| || |
Sbjct 11326 CACCCTGGATAGAGAGCAGAGAGACATCGAAAGTACCACCACCCAAATCGAAAATGAGAA 11267
Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCA---AGACCATACGCAAAAGCAGCAGCAGTTG 282368
| | | | || | ||| || | || ||||| || |||| ||||||||| || |
Sbjct 11266 CGTGCTTCTCCTCGTCAGTCTTACCAGCACCGAGACCGTAAGCAATAGCAGCAGCGGTAG 11207
Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428
| || || || || | | ||| ||||||||||| || || ||||| ||||| || |
Sbjct 11206 GCTCGTTGATGATACGAAGAACGTTAAGACCAGCGATGGAACCAGCATCCTTAGTAGCCT 11147
Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471
| | || || ||||| || || ||||| ||||| || || ||
Sbjct 11146 GACGCTGGGAGTCGTTGAAGTAGGCAGGGACAGTGATGACAGC 11104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740624950369086
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |