Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq58 109 5e-19
seq47 107 2e-18
seq29 93.3 4e-14
>seq58
Length=350062
Score = 109 bits (120), Expect = 5e-19
Identities = 150/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || || |||||||| ||||| || ||||| || | ||| | | | ||||||||
Sbjct 20964 AAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCA-TCCTCGAG 20906
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| || || ||| | || | ||||||||||| ||||| || |||||||||||| ||||
Sbjct 20905 CTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGAT 20846
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| |||| ||| | ||||| | | ||| || |||| ||| | || || ||
Sbjct 20845 CTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTCC 20786
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || |||| ||||||||||||
Sbjct 20785 CGTCAACGTCTTTATGAAAATCTGCAT 20759
>seq47
Length=387992
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | |||||||| ||||| || || || ||| | ||| |||||| |||
Sbjct 346216 AAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCAAGC 346275
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| ||| | || || ||||||||||| ||||| || |||||||||||| |||||
Sbjct 346276 TGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGATC 346335
Query 133575 TTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|| ||| | | || || | || || | | |||||| || | |||| || || ||
Sbjct 346336 TTGCTCTTCA-CAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTTCC 346394
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
||||| || || | || |||||||||
Sbjct 346395 GGTCAAGGTCTTGATAAAGATCTGCATG 346422
>seq29
Length=154453
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| || ||||| || | ||| | | | || || ||||| |||||
Sbjct 41673 GTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCAAGCTGTTTGCC 41731
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || || || ||||| ||||| || |||||||| || | || || |||
Sbjct 41732 AGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTAATTTTGCTCTT 41791
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| ||||| ||||| ||| || || |||| ||||| || || || || |||||
Sbjct 41792 TACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTTTCCTGTTAGAGT 41851
Query 133643 TTTTACGAAAATCTGCAT 133660
|| | ||||||||||||
Sbjct 41852 CTTGATGAAAATCTGCAT 41869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420129253640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |