Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq58 109 5e-19 seq47 107 2e-18 seq29 93.3 4e-14 >seq58 Length=350062 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || || |||||||| ||||| || ||||| || | ||| | | | |||||||| Sbjct 20964 AAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCA-TCCTCGAG 20906 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || ||| | || | ||||||||||| ||||| || |||||||||||| |||| Sbjct 20905 CTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGAT 20846 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| ||| | ||||| | | ||| || |||| ||| | || || || Sbjct 20845 CTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTCC 20786 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || |||| |||||||||||| Sbjct 20785 CGTCAACGTCTTTATGAAAATCTGCAT 20759 >seq47 Length=387992 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | |||||||| ||||| || || || ||| | ||| |||||| ||| Sbjct 346216 AAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCAAGC 346275 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || ||||||||||| ||||| || |||||||||||| ||||| Sbjct 346276 TGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGATC 346335 Query 133575 TTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | || || | || || | | |||||| || | |||| || || || Sbjct 346336 TTGCTCTTCA-CAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTTCC 346394 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||||| || || | || ||||||||| Sbjct 346395 GGTCAAGGTCTTGATAAAGATCTGCATG 346422 >seq29 Length=154453 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || ||||| || | ||| | | | || || ||||| ||||| Sbjct 41673 GTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCAAGCTGTTTGCC 41731 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || || ||||| ||||| || |||||||| || | || || ||| Sbjct 41732 AGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTAATTTTGCTCTT 41791 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | ||||| ||||| ||| || || |||| ||||| || || || || ||||| Sbjct 41792 TACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTTTCCTGTTAGAGT 41851 Query 133643 TTTTACGAAAATCTGCAT 133660 || | |||||||||||| Sbjct 41852 CTTGATGAAAATCTGCAT 41869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420129253640