Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq17 158 3e-33
>seq17
Length=239553
Score = 158 bits (174), Expect = 3e-33
Identities = 431/654 (66%), Gaps = 7/654 (1%)
Strand=Plus/Minus
Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570
||| || ||| || || ||| | | || || || || ||||| || || |||||||||
Sbjct 97725 CAAATGAGTTCGTGTTTCCTTGTTTGCATGAAAGACGACTCTATCGATGGCATTTATGAT 97666
Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630
| || ||| |||||||||||||||| |||| || |||||| || | |||||
Sbjct 97665 ACCCTAAAATCTTGTGCTCTTATTTCTAAATCTGCTGGTGGTATTGGTCTTAATGTTCAC 97606
Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690
|||| || | | || | | ||||| | || ||| | || | || || ||
Sbjct 97605 AATATCCGTGCCACTGGTTCTTACATCGCCGGTACTAACGGTACATCCAACGGTATTCTT 97546
Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT 110750
|||||| | | |||||||| ||||||| ||||| |||| ||||| || | | |
Sbjct 97545 CCAATGCTTCGTGTCTTCAATAACACTGCTCGTTATGTTGATCAGGGTGGCAACAAACGT 97486
Query 110751 ---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807
|| | || ||||| ||||| ||||| |||||| ||| | ||||| ||| | ||
Sbjct 97485 CCAGGTGCTTTCGCTATTTATCTTGAACCCTGGCATGATGATGTTTTTGACTTCATCGAT 97426
Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867
|||||||| || || |||||| | || |||||| | |||| || | |||
Sbjct 97425 CTTCGTAAGAACACTGGTAAGGAAGAAGTCCGTGCCCGTGATCTGTTTTTGGCTCTTTGG 97366
Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCT 110927
||| | || ||||||||||| | ||| | |||| |||| | | ||||||||
Sbjct 97365 ATTCCTGACTTATTCATGAAGAGAGTTAAGTCTGATGGAGAGTGGACATTGATGTGTCC- 97307
Query 110928 CATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAA 110986
|| || | |||||||| ||||||| ||||| | || || ||||| |||||| |
Sbjct 97306 CAACGAATGCCCTGGTCTTGCTGATGTTTATGGTGATGAATTCGAAGAGCTTTACACACG 97247
Query 110987 ATATGAAAAAGAAGGCAAGTTTCG-CAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAA 111045
|||||| || || ||| | || || |||||| | || |||| | |
Sbjct 97246 TTATGAACGTATGGGTAAAGGTCGTCGTAC-CATCAAAGCTCAGAAGCTATGGTACGCCA 97188
Query 111046 TCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATC 111105
| | ||| | ||| ||| || || | ||||| || | ||||| ||||| ||| |
Sbjct 97187 TTTTGGAAGCTCAAACTGAGACAGGTAATCCTTTCATGCTTTATAAGGATCAGGCTAACC 97128
Query 111106 GCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
|||| |||||| ||| | || || || ||| | ||||||||||||||
Sbjct 97127 GCAAGAGTAATCAGCGTAATCTTGGTACTATCAAGAGTTCTAATTTGTGCTGTG 97074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186811112129671
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |