Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq29 96.9 8e-15 seq47 86.0 1e-11 >seq29 Length=154453 Score = 96.9 bits (106), Expect = 8e-15 Identities = 158/227 (70%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| || ||| || || |||||||| || ||||| | || || ||| Sbjct 41872 AAAATG---CAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAA 41816 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 |||||| | || | |||||| || ||| || || ||||| ||| || Sbjct 41815 TCCAATGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCT 41756 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| ||| | ||||||||||| || || ||| | |||||||| | || | | || Sbjct 41755 GACCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGAC 41696 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||||||||||||| ||||||||| | ||| | | ||||| Sbjct 41695 TACAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCTCCGTCTTCG 41649 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | | ||| | ||||||||| ||||||||||||| || ||||||| | || Sbjct 41649 CGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTG 41708 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||||| ||||| || || ||||||||||| |||||||| Sbjct 41709 CGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTG 41752 >seq47 Length=387992 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || ||||| || |||||| | |||||||| | ||| Sbjct 346418 CAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCTAATGAT 346359 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| | || ||| ||||| || || ||||| ||| || ||| || Sbjct 346358 ACCATCGAAGCTGTGAAGAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAGCAG 346299 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||| | || || || | ||| | |||| || ||| || Sbjct 346298 CGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAACATC 346239 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 ||||| ||||| ||||| || Sbjct 346238 CAGAAGGAGTCCACTCTGCA 346219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819119229231