Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq29 96.9 8e-15
seq47 86.0 1e-11
>seq29
Length=154453
Score = 96.9 bits (106), Expect = 8e-15
Identities = 158/227 (70%), Gaps = 3/227 (1%)
Strand=Plus/Minus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| || ||| || || |||||||| || ||||| | || || |||
Sbjct 41872 AAAATG---CAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAA 41816
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
|||||| | || | |||||| || ||| || || ||||| ||| ||
Sbjct 41815 TCCAATGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCT 41756
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| ||| | ||||||||||| || || ||| | |||||||| | || | | ||
Sbjct 41755 GACCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGAC 41696
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||| ||||||||||||| ||||||||| | ||| | | |||||
Sbjct 41695 TACAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCTCCGTCTTCG 41649
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||| | | ||| | ||||||||| ||||||||||||| || ||||||| | ||
Sbjct 41649 CGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTG 41708
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| |||||||| ||||| || || ||||||||||| ||||||||
Sbjct 41709 CGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTG 41752
>seq47
Length=387992
Score = 86.0 bits (94), Expect = 1e-11
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || | || ||||| || |||||| | |||||||| | |||
Sbjct 346418 CAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCTAATGAT 346359
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| ||||| | || ||| ||||| || || ||||| ||| || ||| ||
Sbjct 346358 ACCATCGAAGCTGTGAAGAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGACCAGCAG 346299
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| ||||||||||| || |||||| | || || || | ||| | |||| || ||| ||
Sbjct 346298 CGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAACATC 346239
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| ||||| ||||| ||
Sbjct 346238 CAGAAGGAGTCCACTCTGCA 346219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819119229231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |