Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq29 93.3 4e-14 seq58 89.7 5e-13 >seq29 Length=154453 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | |||||||| || ||||||||||| | ||| || |||||| Sbjct 41660 AACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTC 41719 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 |||||||| || | |||| ||||| ||||| || ||||| || ||||| ||||| | Sbjct 41720 AAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACT 41779 Query 132034 AATTTT-TTGTTTCAACTG-TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 |||||| | ||| || | || | || || | | || || |||| || | || Sbjct 41780 AATTTTGCTCTTT--ACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTC 41837 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| || |||||||||||||| Sbjct 41838 TTTCCTGTTAGAGTCTTGATGAAAATCTGCAT 41869 >seq58 Length=350062 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || || | ||||| || || ||||||||||| | ||| || ||| ||| Sbjct 20967 ACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCG 20908 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||||||||| | |||| | |||||| || || ||||| || ||||| || ||| | Sbjct 20907 AGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 20848 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || ||| | || | || || | | ||| || |||| || | || || Sbjct 20847 ATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTT 20788 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||| || ||||||||||||||||| Sbjct 20787 CCCGTCAACGTCTTTATGAAAATCTGCAT 20759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610538701960