Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq17 383 2e-101 seq28 179 5e-40 >seq17 Length=239553 Score = 383 bits (424), Expect = 2e-101 Identities = 1358/2102 (65%), Gaps = 51/2102 (2%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || |||||||| | | | ||||| | || || ||||| |||||||| ||||||| | Sbjct 96104 GTGAACTGAATAGCAGCAGCTGCGGCCTGAGTGCGCAGATAATACATACCAGTTTTCAAA 96163 Query 68434 CC--TAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGA-ATAACTTGGATCGGCT 68490 || ||||| || ||||||||||||||||| || || ||| ||| | || | || Sbjct 96164 CCCTTAGAC--CAACCGTAGAAATGCATACTAGTGAGCTTGCCCATAGTTGGGGCCTGC- 96220 Query 68491 ATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTT 68550 || | |||||||| ||||| || || ||||||| || | | | || ||||| | Sbjct 96221 ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGCAGCCATATCA 96280 Query 68551 ATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGA 68610 ||||| |||| ||| |||||||| | ||||| | | | || ||||| | ||| Sbjct 96281 ATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAATATCCTGAGGA 96340 Query 68611 A-----GGCTCGTATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCAT 68665 | || || ||| ||| || |||||| | || | | ||||||| || |||| Sbjct 96341 ATCGAGGGGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTCTTCATATCAT 96398 Query 68666 CATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATT 68725 | ||||| | | || | | | || |||| |||||||| ||||| |||| Sbjct 96399 CGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACGATTTGGAATT 96458 Query 68726 CCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTAT 68785 | |||| || ||||| | || ||| | || ||| | || || | | ||||||| | Sbjct 96459 CACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAACATTCATTGT 96518 Query 68786 TTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAA 68845 || | ||||||| ||| || ||||| ||||||||||| || | | | ||| | | Sbjct 96519 AGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGAGAATTACGCA 96578 Query 68846 GACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAA 68905 ||||| | ||| | |||| | | | ||| ||||| | |||| ||| || Sbjct 96579 AACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCAGTAGGTGTAA 96638 Query 68906 CATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCAT 68965 | |||||||||||| || || | ||| || | || || |||| Sbjct 96639 CGCCCCAAAGATCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGCCTTCGTAAGTCTCAT 96698 Query 68966 AAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTT 69025 |||| || || | ||| | || | || || | || | | ||| || || | Sbjct 96699 AAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTGCATGATATATGGTCT 96758 Query 69026 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAA-AGA 69084 |||| |||| |||| || ||||| || ||| | || || || | | | | | | Sbjct 96759 CGAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAGGC-AGTCTGAGCATA 96817 Query 69085 ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAA 69144 | || ||||||||||| || | ||| || | | | || |||||||| | | | || ||| Sbjct 96818 AAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTATGACGCATGTTGGAA 96877 Query 69145 CTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACT 69204 | ||| ||||| | ||| || ||||| |||| ||||||| ||| | | || | | Sbjct 96878 CGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGATTCA-AGTTATAAGT 96936 Query 69205 ACTAC-TTTAACCACGTCCTTTA---GTTTGAGAAAATCAA-------ATCGTCCAT--- 69250 | || ||| || || || | | | |||| | || | ||| ||| | Sbjct 96937 AATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAACACCATCATCCTTTGT 96996 Query 69251 CTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAAT 69310 || || |||| | || || || || || |||||||| || || || | || | Sbjct 96997 CTTTA-CAAAGGCAGGGAGAGCAACTGAAGCCAGATTACATACAGCAGTTTCCTCAGGAC 97055 Query 69311 TTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCT 69370 | | || | | || || || | |||| || |||||||| || ||||| ||| Sbjct 97056 TAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATAGTACCAAGATTACGCT 97115 Query 69371 GATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCT 69430 |||||||||| |||| ||||| ||||| || || ||| |||| || ||| | | Sbjct 97116 GATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGGATTACCTGTCTCAGTTT 97175 Query 69431 GAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT--TACG--GTCTTGTAACGC 69486 ||| ||| | ||| | | ||| | | ||| || || |||| | | | || | Sbjct 97176 GAGCTTCCAAAATGGCGTACCATAGCTTCTGAGCTTTGATGGTACGACGACCTTTACCCA 97235 Query 69487 TTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAAT 69546 | | |||||| |||| || ||| |||||||||||| || |||||||| | | Sbjct 97236 TACG----TTCATAACGTGTGTAAAGCTCTTCGAATTCATCACCATAAACATCAGCAAGA 97291 Query 69547 CCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATA 69606 ||||| ||||| || ||||||||||||| |||| | ||||| |||||||| ||||| Sbjct 97292 CCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAGACTTAACTCTCTTCATG 97351 Query 69607 AATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 |||| || |||||||||||||| | ||| ||||| | || | |||||| || || Sbjct 97352 AATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCACGGACTTCTTCCTTACCA 97411 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 || || || |||||||| || || | || |||| |||||| ||||| ||||| || Sbjct 97412 GTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCCAGGGTTCAAGATAAATA 97471 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | | || || ||||| || || |||||||| | || | ||||||||||| || Sbjct 97472 GCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAACGAGCAGTGTTATTGAAG 97531 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846 || | ||||| |||| |||||| || ||| |||| || || || | || ||| || Sbjct 97532 ACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTACCGGCGATGTAAGAACCA 97591 Query 69847 CTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 69906 | || || ||||| || | ||||| || || || || |||||| || |||||| Sbjct 97592 GTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAGATTTAGAAATAAGAGCA 97651 Query 69907 CAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAA 69966 ||| ||| | || ||||| || || || || || ||| ||||| || ||| ||| Sbjct 97652 CAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTTTCATGCAAACAAGGAAA 97711 Query 69967 CAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTG 70026 || | ||||||| | ||| || ||||| | || || ||||| ||||| ||| Sbjct 97712 CACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAGTGGGAGAAGCGTGGGTG 97771 Query 70027 AACCATTTTTCAGAAAGCAGATTGTATGTTTCAAT-AGCT----GATTCTATATCCCACT 70081 || | || | || | || | ||||||||| || | || ||| || | || Sbjct 97772 AAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAGGGATGTTAAAACC---- 97827 Query 70082 GATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTAT 70141 ||| || || || || || | ||| | ||||||||| || ||||| | || Sbjct 97828 -ATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTCGTGAACAACACCAT 97886 Query 70142 TTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGT 70201 | | ||||| || ||| || | || ||||| || || || || |||||| || | Sbjct 97887 TAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAAGTAATTGTATTTGAAAT 97946 Query 70202 CTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAA 70261 | | | |||| || ||| || | || | | || || | || | || || Sbjct 97947 CACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTTCTTGACGACTTCATGAA 98006 Query 70262 CAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAAT 70321 | || || || || || | | | ||| | || ||||||||| || ||| || Sbjct 98007 CCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGGTTAACATAGGTGTATAGAT 98066 Query 70322 CTTCCATTACATCACT-AAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATT 70380 | || | || | ||| ||| || | ||| || | |||||| | || || || || || Sbjct 98067 CCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTGAAGGTTAGAAATAGCAATA 98125 Query 70381 CTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCA 70440 | || || |||| |||||||||||||||||| || || | |||| || |||| || Sbjct 98126 CGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCATACTAGCAGCAGTTTCAGCT 98185 Query 70441 GC 70442 || Sbjct 98186 GC 98187 >seq28 Length=170371 Score = 179 bits (198), Expect = 5e-40 Identities = 583/897 (65%), Gaps = 14/897 (2%) Strand=Plus/Plus Query 39311 GACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCT 39370 |||||||| || |||||||| || ||| || |||||||| ||||| || || || Sbjct 13704 GACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTTACCA 13763 Query 39371 TCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAAT 39430 ||||||| ||||| ||||||||||| || ||||| | |||| || || || Sbjct 13764 GCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTTCTGA 13823 Query 39431 CCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAA 39490 || || || | || |||||| || ||||| || | || ||||| | || | Sbjct 13824 CCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTCGGCA 13883 Query 39491 TTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACG 39550 ||||| || | || | || || | ||| || | | |||| | || || || || Sbjct 13884 TTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATCGACT 13943 Query 39551 GCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGA---TGCAATAAATGTTTA 39607 || || || | || | ||| ||| || | ||| | | ||||| | Sbjct 13944 GCTTCAGTAAGAAT--ACGTT-CTATAACAAAGGGTGCTGGTCTGTTCTCCAAATGGCTG 14000 Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 | | | || ||||| || ||| || ||||| || | | ||| || |||||| Sbjct 14001 TAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTTACTG 14060 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || | || ||||| || ||||| ||||||||||| || || |||||||| ||||| Sbjct 14061 AAGGTCAAACCCGGCATAAGGCCACGTTTTTTGAGCCAGAAAATAGCAGCAAAGGATCCT 14120 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 || ||||| | || || || ||||| |||||||| |||| ||| || |||| | || Sbjct 14121 GAGAAGAAAACACCCTCAACAGCTGCGAATGCAACTAGTCGCTCAGCGAAACTAGCTTCC 14180 Query 39788 T--TATGT-ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 | | || ||||| | ||||| | || ||||||| | ||| || || Sbjct 14181 TCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCGTGAAA 14240 Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904 || |||| ||| || | || ||| | | | || || || || || || || | ||| Sbjct 14241 ATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAGAAGA 14300 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 || ||||| || || || ||||| || ||| ||||| ||||||||||| || | || Sbjct 14301 CTGTACATCTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTTGGCC 14360 Query 39965 TCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCA 40024 |||| || || || | || || || |||| || |||||||| || || ||| Sbjct 14361 TCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACCGTCA 14420 Query 40025 CTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTA 40084 |||||||||||||| || | || || |||||| || ||| ||| ||| || Sbjct 14421 CTAGCGGCAAAAAACGCTAGAACTCGTGAAATAAAGTAACGTTCGTCGTCATTCAGCCTA 14480 Query 40085 ---TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCC 40141 | |||||| | ||||| | | | ||| || ||||| | |||||| || || || Sbjct 14481 AGTTCCCAGTCCTGAATATCCTGGGCCAGATCAACCTCTTCGGTTGTCCAGAAAGAAGCT 14540 Query 40142 TCTGCCTTTTTGTACATGTTCCATATA-TCACGATATTGTATTGGAAAAATAACAAA 40197 || || | || || | ||| ||| || || || | || ||||| | |||||| Sbjct 14541 TCAGCTTGCTTATAAGCCTGCCAGATACTCTCG-TACTCGATAGGAAAGAGAACAAA 14596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907846914040