Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq17 259 6e-64 seq28 105 8e-18 >seq17 Length=239553 Score = 259 bits (286), Expect = 6e-64 Identities = 1129/1759 (64%), Gaps = 49/1759 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| | ||| ||||| | || || || ||||| ||||| |||| | ||| Sbjct 97866 CCACAGCATATGATCATGAGAGTTGCTATTGGTATCCATGGTTTTAACATCCCTAAGGTC 97807 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | || ||||||||| ||||||| | | ||| |||| ||||| | || || | | Sbjct 97806 ATCGAAACATACGACTTGATGTCCAACAAGTAC-TTCACCCACGCTTCTCCCACTTTGTA 97748 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTT---GCTTCCTTATCGCCAACAAGGA 104397 |||||| ||||| || ||||| |||||| |||| | |||||| | || || || Sbjct 97747 CAATGCCGGTACTCCCAGACCTCAAATG---AGTTCGTGTTTCCTTGTTTGCATGAAAGA 97691 Query 104398 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 104457 ||||| ||| | || || |||| || || | ||||| | || || || | || Sbjct 97690 CGACTCTATCGATGGCATTTATGATACCCTAAAATCTTGTGCTCTTATTTCTAAATCTGC 97631 Query 104458 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGAC 104517 ||| |||||||| | | | || || | | |||| | ||| || || || Sbjct 97630 TGGTGGTATTGGTCTTAATGTTCACAATATCCGTGCCACTGGTTCTTACATCGCCGGTAC 97571 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 || ||| ||| | |||||| ||||||||||||| || || || ||| || || || Sbjct 97570 TAACGGTACATCCAACGGTATTCTTCCAATGCTTCGTGTCTTCAATAACACTGCTCGTTA 97511 Query 104578 TGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 ||| |||| | ||| | | || | || || |||| | |||||||| || |||| Sbjct 97510 TGTTGATCAGGGTGG-CAACAAACGTCCAGGTGCTTTCGCTATTTATCTTGAACCCTGGC 97452 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 | | ||| | | || ||| | || | ||| ||| ||| | || || | || Sbjct 97451 ATGATGATGTTTTTGACTTCATCGATCTTCGTAAGAACACTGGTAAGGAAGAAGTCCGTG 97392 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| ||||| || | ||||| |||||||| || | ||||||||||||||| || Sbjct 97391 CCCGTGATCTGTTTTTGGCTCTTTGGATTCCTGACTTATTCATGAAGAGAGTTAAGTCTG 97332 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 ||| | ||| | | | ||||| || || || |||||||| | |||| ||| Sbjct 97331 ATGGAGAGTGGACATTGATGTGTCCCAACGAATGC-CCTGGTCTTGCTGATGTTTATGGT 97273 Query 104813 GAGGAGTTTGAAGCCCTTTACACA----AAGTACG--AGGAAGAAGGTCGGGCGACTGCG 104866 || || || |||| ||||||||| | | ||| || ||||||| | Sbjct 97272 GATGAATTCGAAGAGCTTTACACACGTTATGAACGTATGGGTAAAGGTCG------TCGT 97219 Query 104867 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 || | |||| | || | | ||| | || ||| | | ||||||| ||||| |||| Sbjct 97218 ACCATCAAAGCT-CAGAAGCTATGGTACGCCATTTTGGAAGCTCAAACTGAGACAGGTAA 97160 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || | ||||||||| || || ||||| ||||||||||| ||| | ||| Sbjct 97159 TCCTTTCATGCTTTATAAGGATCAGGCTAACCGCAAGAGTAATCAGCGTAATCTTGGTAC 97100 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAAT-TTACAGACAAAGATGAGACGG 105044 ||||||||||| ||| | || |||||| | || | | || | || || || | Sbjct 97099 TATCAAGAGTTCTAATTTGTGCTGTGAAATCGTTGAGTACTCTAGTC-CTGAGGAAACTG 97041 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACA 105103 |||| ||||| || || ||| | |||||||| | ||| | || | || | | Sbjct 97040 CTGTATGTAATCTGGCTTCAGTTGCTCTCCCTGCCTTTGTAAAGACAAAGGATGATGGTG 96981 Query 105104 TT-----TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACA 105158 || ||||| | | | || || ||| ||| || | || | ||| | || Sbjct 96980 TTCTCTATGATTTCAAGCATTTGCATGAGGTTGTCAAATCTATTACTTATAACTTGAATC 96921 Query 105159 GAGTTATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACAC 105217 | |||| |||| |||| ||||| || ||| |||||| || || ||| | || Sbjct 96920 AAATTATCGATAAGAATTACTACCCTGTCCCAGA-GGCTCGTCGTTCCAACATGCGTCAT 96862 Query 105218 CGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA 105277 | || |||| | | |||||| | || | || |||| ||| || | | | | Sbjct 96861 AGACCGATTGCTTTGGGTGTTAATGGCTTGGCAGATGCTTTCTTTATGCTCAGACTGCCT 96802 Query 105278 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCC 105337 ||||| ||| | || || | || | ||| | ||||| |||||||| ||||| || Sbjct 96801 TTTGACTCCCAAGAGGCCCAAGAGCTTAATATTCAGATATTCGAGACCATATATCATGCA 96742 Query 105338 GCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 105397 ||| |||| || | ||| | || ||||||||||||| ||||| || | || || Sbjct 96741 GCTGTTGAAGCTTCTATCGAGATTGCTAAGGTTGATGGTCCTTATGAGACTTACGAAGGC 96682 Query 105398 TCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA---GCTT 105454 ||| ||||| |||| |||| | ||| | |||| || | ||| | ||| Sbjct 96681 AGTCCTGCTTCGGAAGGTCAGCTTTCCTACGATCTTTGGG-GCGTTACACCTACTGACTT 96623 Query 105455 CACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTC 105514 | |||||||| || | || | ||||| || | ||| | ||||| ||| Sbjct 96622 --GTGGGACTGGGATACTTTGAAAGCCGATCTCAAGAAGTATGGTTTGCGTAATTCTCTT 96565 Query 105515 CTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 105574 || | || || ||||| || || || || | |||||||| || | |||||||| || Sbjct 96564 CTAGTAGCACCTATGCCTACTGCTTCTACTTCTCAAATCTTAGGCTACAATGAATGTTTC 96505 Query 105575 GAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633 || || | ||| | ||| |||| ||| |||||| | | || || || || || || Sbjct 96504 GAGCCTTTCACCTCAAACTTCTACTCT-AGAAGAGTCTTGGCTGGTGAATTCCAAATCGT 96446 Query 105634 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 105693 || |||| | | ||||| || || ||||||||| | | ||||||||| | Sbjct 96445 TAATCCCTATCTTCTCAAGGACCTTGTTGATATGGGTCTCTGGAACGATGATATGAAGAA 96386 Query 105694 TCTCATG-GTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTA 105752 | || || ||| |||||||| ||| || | || ||||| | || |||| Sbjct 96385 TAGATTGATTGCAAG-TGGTGGTTCTATTAAAGACATCCCCTCGATTCCTCAGGATATTA 96327 Query 105753 AGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAG 105812 || | | ||| || || |||||||||| |||| | ||||| ||||| || | Sbjct 96326 AGGATCTATACAAGACCGTCTGGGAAATCAGTCAGAAGACCATTATTGATATGGCTGCCG 96267 Query 105813 ATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGA 105872 |||||||| |||||||| || ||||| ||| ||||| | | |||| | ||||| | Sbjct 96266 CTCGTGGTCCTTTCATTGACCAGAGTCAGAGTTTGAATATTTACATGCAGGCCCCAACTA 96207 Query 105873 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 105932 || ||||||| || |||||| | ||| ||||| |||||| | ||||| || |||| Sbjct 96206 TGGGCAAGCTCACTAGTATGCATTTCTACGGTTGGTCTAAGGGTTTGAAAACTGGTATGT 96147 Query 105933 ATTACCTCCGATCTAAGGC 105951 |||| || || || |||| Sbjct 96146 ATTATCTGCGCACTCAGGC 96128 >seq28 Length=170371 Score = 105 bits (116), Expect = 8e-18 Identities = 113/147 (77%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 || ||||||||||| | ||||| || |||||||||| | |||||||| || ||||| Sbjct 14170 TTCGCTGAGCGACTAGTTGCATTCGCAGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTT- 14112 Query 94858 TGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 ||| ||||||| |||||||| || || || || ||||| ||| | |||| ||||| Sbjct 14111 TGCTGCTATTTTCTGGCTCAAAAAACGTGGCCTTATGCCGGGTTTGACCTTCAGTAACGA 14052 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCA 94943 | | || |||||||||||||| || || Sbjct 14051 GTTGATTTCTCGTGACGAGGGTCTTCA 14025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259990725640