Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq17 143 3e-29
seq28 100 3e-16
>seq17
Length=239553
Score = 143 bits (158), Expect = 3e-29
Identities = 400/608 (66%), Gaps = 12/608 (2%)
Strand=Plus/Minus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175
||||| |||| || | || |||||||| || |||| ||| ||| |||||||
Sbjct 97853 TCATGAGAGTTGCTATTGGTATCCATGGTTTTAACATCCCTAAGGTCATCGAAACATACG 97794
Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235
|| ||||| | | |||| |||||| ||||| | || || | | ||| ||||||||
Sbjct 97793 ACTTGATGTCCAACAAGTACTTCACCCACGCTTCTCCCACTTTGTACAATGCCGGTACTC 97734
Query 19236 ACAACCCGCAGATG---TCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGG 19292
|| || || ||| ||| |||||||| || ||||| || ||| || || |
Sbjct 97733 CCAGACCTCAAATGAGTTCG---TGTTTCCTTGTTTGCATGAAAGACGACTCTATCGATG 97677
Query 19293 GCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGA 19352
|||| || || || || || || || | || || || | | || ||||| ||
Sbjct 97676 GCATTTATGATACCCTAAAATCTTGTGCTCTTATTTCTAAATCTGCTGGTGGTATTGGTC 97617
Query 19353 TCCACTGCTCG-AATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCC 19411
| | || || |||||||| | | |||| | ||| || || ||||| | ||
Sbjct 97616 TTAA-TGTTCACAATATCCGTGCCACTGGTTCTTACATCGCCGGTACTAACGGTACATCC 97558
Query 19412 GACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGG 19471
||||||| | |||||||| || |||||||| ||||| || | || || | |||||
Sbjct 97557 AACGGTATTCTTCCAATGCTTCGTGTCTTCAATAACACTGCTCGTTATGTTGATCAGGGT 97498
Query 19472 GGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCA 19529
||| |||||| || | ||| ||||| || || || || || ||||| | || ||
Sbjct 97497 GGCAACAAACGTCCAGGTGCT--TTCGCTATTTATCTTGAACCCTGGCATGATGATGTTT 97440
Query 19530 TGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCT 19589
| || ||| |||| || || |||| ||| | || || | || || || || |
Sbjct 97439 TTGACTTCATCGATCTTCGTAAGAACACTGGTAAGGAAGAAGTCCGTGCCCGTGATCTGT 97380
Query 19590 TCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGC 19649
| ||| | |||||||| ||| |||||||| ||| ||| || || | ||| |||
Sbjct 97379 TTTTGGCTCTTTGGATTCCTGACTTATTCATGAAGAGAGTTAAGTCTGATGGAGAGTGGA 97320
Query 19650 ACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATG 19709
||||||| || ||||||||||||| || | || || || || || | ||| | |
Sbjct 97319 CATTGATGTGTCCCAACGAATGCCCTGGTCTTGCTGATGTTTATGGTGATGAATTCGAAG 97260
Query 19710 AGTTGTAC 19717
|| | |||
Sbjct 97259 AGCTTTAC 97252
>seq28
Length=170371
Score = 100 bits (110), Expect = 3e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 60015 TTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGC 60074
|||||||| || || || ||||||||||||||||||||| |||||||| ||||||||
Sbjct 14128 TTCTTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAACGTGGCCTTATGCCGGGT 14069
Query 60075 CTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119
||| ||| |||||| ||||||| || |||||||| || |||
Sbjct 14068 TTGACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCAT 14024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524038921840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |