Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq47 156 5e-33 seq58 140 4e-28 seq29 125 8e-24 >seq47 Length=387992 Score = 156 bits (172), Expect = 5e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||| ||||||| | ||||| |||||||| |||||||| || ||||| | Sbjct 346421 ATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCTAAT 346362 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAG-GACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||| | | | ||||| || || ||| |||||||| || |||||||| ||||| Sbjct 346361 GATACCATCGAAGCTGTGAAGAGCAAGAT-CAGCGACAAGGAAGGTATTCCTCCTGACCA 346303 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || ||||| ||||| || ||||| | || || || | || ||||| Sbjct 346302 GCAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAA 346243 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| ||| | || | ||| | || ||||| Sbjct 346242 CATCCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTTTGCGTGGTGG 346195 >seq58 Length=350062 Score = 140 bits (154), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || | |||||| | || || ||||||||||| || ||||||||||| Sbjct 20758 AATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTAA 20817 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAG-GACAAGGAGGGAATTCCTCCAGACC 27523 ||| | ||| | | | || || || ||| |||||||| || |||||||| |||| Sbjct 20818 TGACACCATCGAGGCTGTCAAAAGCAAGAT-CAGCGACAAGGAAGGTATTCCTCCTGACC 20876 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||| | || || |||||||| || |||||||||| || ||||| | ||||| | Sbjct 20877 AGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTACA 20936 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| |||||| |||| | || | ||||| || ||||| Sbjct 20937 ACATCCAGAAGGAGTCCACTATTCACTTGGTGCTTCGTCTCCGTGGTGG 20985 >seq29 Length=154453 Score = 125 bits (138), Expect = 8e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || ||||||| || || || |||||||| || || |||||||| || Sbjct 41870 AATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCCAA 41811 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||||| | ||| |||||| || ||||| || |||||||| ||||| Sbjct 41810 TGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGACCA 41751 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||||| || || ||||| || || || || |||| || ||||| | ||||| || Sbjct 41750 ACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTACAA 41691 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| || || ||||||||||| | || | |||||||| || ||| Sbjct 41690 CATCCAGAAAGAGTCCACTCTTCACTTGGTTCTCCGTCTTCGTGGCGGA 41642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309608694320