Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq47 156 5e-33
seq58 140 4e-28
seq29 125 8e-24
>seq47
Length=387992
Score = 156 bits (172), Expect = 5e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||| ||||||| | ||||| |||||||| |||||||| || ||||| |
Sbjct 346421 ATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCTAAT 346362
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAG-GACAAGGAGGGAATTCCTCCAGACCA 27524
|||| ||| | | | ||||| || || ||| |||||||| || |||||||| |||||
Sbjct 346361 GATACCATCGAAGCTGTGAAGAGCAAGAT-CAGCGACAAGGAAGGTATTCCTCCTGACCA 346303
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || ||||| ||||| || ||||| | || || || | || |||||
Sbjct 346302 GCAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAA 346243
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||||| ||| | || | ||| | || |||||
Sbjct 346242 CATCCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTTTGCGTGGTGG 346195
>seq58
Length=350062
Score = 140 bits (154), Expect = 4e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || | |||||| | || || ||||||||||| || |||||||||||
Sbjct 20758 AATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTAA 20817
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAG-GACAAGGAGGGAATTCCTCCAGACC 27523
||| | ||| | | | || || || ||| |||||||| || |||||||| ||||
Sbjct 20818 TGACACCATCGAGGCTGTCAAAAGCAAGAT-CAGCGACAAGGAAGGTATTCCTCCTGACC 20876
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||||||| | || || |||||||| || |||||||||| || ||||| | ||||| |
Sbjct 20877 AGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTACA 20936
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||| ||||| |||||| |||| | || | ||||| || |||||
Sbjct 20937 ACATCCAGAAGGAGTCCACTATTCACTTGGTGCTTCGTCTCCGTGGTGG 20985
>seq29
Length=154453
Score = 125 bits (138), Expect = 8e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || ||||||| || || || |||||||| || || |||||||| ||
Sbjct 41870 AATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCCAA 41811
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||||| | ||| |||||| || ||||| || |||||||| |||||
Sbjct 41810 TGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGACCA 41751
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||||| || || ||||| || || || || |||| || ||||| | ||||| ||
Sbjct 41750 ACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTACAA 41691
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| || || ||||||||||| | || | |||||||| || |||
Sbjct 41690 CATCCAGAAAGAGTCCACTCTTCACTTGGTTCTCCGTCTTCGTGGCGGA 41642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309608694320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |