Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq47 113 3e-20 seq58 105 4e-18 seq29 93.3 3e-14 >seq47 Length=387992 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| |||||| |||||| || |||||||| || ||||| || || |||| ||| Sbjct 346213 ACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCA 346272 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || || || || || | |||||| ||||| || || | || |||||||| || Sbjct 346273 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 346332 Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 ||||| || | | | || || || | ||||||||| | || || || || Sbjct 346333 ATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTT 346392 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 ||||| || || || | ||| ||||||||||| Sbjct 346393 CCGGTCAAGGTCTTGATAAAGATCTGCATGTT 346424 >seq58 Length=350062 Score = 105 bits (116), Expect = 4e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || | |||| |||||| || ||||| || || ||||| || || Sbjct 20976 AGACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGG 20917 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || |||||||| || || || |||||||| ||||| || || | || ||| Sbjct 20916 CCATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCC 20857 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| ||||||| ||| | | || ||||| | ||| || || | ||| Sbjct 20856 TTGTCGCTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTA 20797 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || || || || || ||||| || | ||||||||||| || Sbjct 20796 ATAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATTTT 20756 >seq29 Length=154453 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | |||||| | ||||| || |||||| ||| || || ||||| || || || Sbjct 41643 CCGCCACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAG 41702 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | |||||||| ||||| || || || || | ||| |||||||| || || Sbjct 41703 AGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGA 41762 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||| || | || || |||| | ||| ||||| | | || || Sbjct 41763 ATACCTTCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACC 41822 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || | ||| || || || || |||| || || | ||||||||||| ||| Sbjct 41823 TCGAGGGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTTG 41873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729174229863