Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq29 185 2e-41
seq58 154 3e-32
seq47 152 1e-31
>seq29
Length=154453
Score = 185 bits (204), Expect = 2e-41
Identities = 176/225 (78%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | |||||||||||||||||| |||||||| || || | |||||
Sbjct 41648 ACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGT 41707
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||| ||||| ||||| ||||||||||| ||||||||||||||||||| ||
Sbjct 41708 GCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACC 41767
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||| || || || || ||| || ||||||||| | ||||||||||||
Sbjct 41768 TTCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAG 41827
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| |||||||| || |||||||| | || | |||||||||
Sbjct 41828 GGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 41872
>seq58
Length=350062
Score = 154 bits (170), Expect = 3e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||||| ||||||||| || |||||||| || || | |||||| | |||||
Sbjct 20970 AGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 20911
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| || || |||||||| | || || ||||||||||||| |||||||||||
Sbjct 20910 TCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCG 20851
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||| ||| || |||||||||||| ||||||||||| || || |||
Sbjct 20850 CTGATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTC 20791
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|||||||| | ||||||| || | |||||||||
Sbjct 20790 TTTCCCGTCAACGTCTTTATGAAAATCTGCATTTT 20756
>seq47
Length=387992
Score = 152 bits (168), Expect = 1e-31
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| ||||||||||| || ||||||||||| || | ||| || | || || || ||||||
Sbjct 346219 TGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCAAGCTGC 346278
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
||||| ||||||||||| || || ||||||||||||| ||||||||||| ||||||
Sbjct 346279 TTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGATCTTG 346338
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||||| ||||||||| ||| || || || |||||||| |||||||| ||
Sbjct 346339 CTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTTCCGGTC 346398
Query 211092 AGAGTCTTTACAAACACCTGCATTTTA 211118
| ||||| | ||| | |||||| |||
Sbjct 346399 AAGGTCTTGATAAAGATCTGCATGTTA 346425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159150351468515
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |