Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq28 201 1e-46 >seq28 Length=170371 Score = 201 bits (222), Expect = 1e-46 Identities = 549/832 (66%), Gaps = 9/832 (1%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || || || ||||| ||||||||||| || || || | || |||||||| Sbjct 13719 TTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTTACCAGCCAATGAAATATTC 13778 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAGAGCTACAAG 4375 ||||| ||||| || ||||| | | ||||| | || ||| || | |||||| || Sbjct 13779 TCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTTCTGACCCAA-AGCTACGAG 13837 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 || || ||||| ||||| || | ||||||| |||| | ||| || || || | || Sbjct 13838 CAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTCGGCATTCATACCGAGTAG 13897 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 || ||||| | || | | | || |||| || || ||| || ||||| || | || Sbjct 13898 ACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATCGACTGCTTCAGTAAGAAT 13957 Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAA 4555 | || ||| | | |||| | || | || | | | | | ||| || || Sbjct 13958 ACGTTCTATAACAAAGGGTGCTGGTCTGTTCTCCAAATGGCTGTAAAGGAGACAAGCGAA 14017 Query 4556 ATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCAT 4615 ||| ||| | ||| ||||| | ||||| |||||| || || || || ||||| Sbjct 14018 ATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTTACTGAAGGTCAAACCCGGCAT 14077 Query 4616 TAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTC 4675 | || | ||||| ||||| || ||||| ||||| || || || ||||| | || || Sbjct 14078 AAGGCCACGTTTTTTGAGCCAGAAAATAGCAGCAAAGGATCCTGAGAAGAAAACACCCTC 14137 Query 4676 TACGGCGGCAAACGCTACTAATCGGGACCCGAA-CGAGCTGGCTTTGTCTTTAATCCATT 4734 || || || || || |||| ||| |||| | |||| || ||| ||||||| Sbjct 14138 AACAGCTGCGAATGCAACTAGTCGCTCAGCGAAACTAGCTTCCTC-GTCAGTAATCCAGC 14196 Query 4735 TTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT 4794 | ||||| || || || |||| || | ||||| ||| | || || | ||| || Sbjct 14197 GAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCGTGAAAATGGCATCAAA-AAGG 14255 Query 4795 TACTTTT-TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAA 4853 ||| ||| | || | | |||||||| || || || || ||||| ||||| Sbjct 14256 AACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAGAAGACTGTACATCTCAGAG 14315 Query 4854 TGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACT 4913 || || || || || |||||| |||||||||||||| | || || | | ||| Sbjct 14316 TGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTTGGCCTCAGAGATACCAACG 14375 Query 4914 TCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAAC 4973 || ||| || || || ||||| || || || ||||||||||| || ||||||||| Sbjct 14376 TCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACCGTCACTAGCGGCAAAAAAC 14435 Query 4974 GCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTT---TTTCCAGTGGGGC 5030 || | ||| | || |||||||| ||||||| || || | || ||||| | Sbjct 14436 GCTAGAACTCGTGAAATAAAGTAACGTTCGTCGTCATTCAGCCTAAGTTCCCAGTCCTGA 14495 Query 5031 AAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTT 5082 | ||| | | | |||||| ||||| ||||| || || ||||| |||| Sbjct 14496 ATATCCTGGGCCAGATCAACCTCTTCGGTTGTCCAGAAAGAAGCTTCAGCTT 14547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049022281963