Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq29 100 7e-16
seq58 98.7 2e-15
seq47 89.7 1e-12
>seq29
Length=154453
Score = 100 bits (110), Expect = 7e-16
Identities = 152/213 (71%), Gaps = 5/213 (2%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| |||||||| ||||||||||| || | | || | |||||||| |
Sbjct 41663 CAAG-TGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAA 41721
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| || ||||||||||| | || ||||| | | || |||||||| || ||
Sbjct 41722 GCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTAA 41781
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|||| || || | ||| | | |||| || | || || || || || ||||| ||
Sbjct 41782 TTTTGCTCTTTACGGCCTCAATGGTGTCATTGGA--TTCAACCTCGAGGGTGATAGTCTT 41839
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || |||||||| | ||| | |||||||||
Sbjct 41840 TCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 41872
>seq58
Length=350062
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/211 (71%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||| ||| ||||| || ||||||||||| || | | || | ||||| || |
Sbjct 20965 CAAG-TGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGA 20907
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| || |||||||| | | ||||||||| | | || |||||||| || |
Sbjct 20906 GCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTGA 20847
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||||| ||| | | |||| | ||| || || || |||||||| || |
Sbjct 20846 TCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTTTC 20787
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|||| | ||||| | ||| | |||||||||
Sbjct 20786 CCGTCAACGTCTTTATGAAAATCTGCATTTT 20756
>seq47
Length=387992
Score = 89.7 bits (98), Expect = 1e-12
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| ||||| ||||| || |||||||| || |||| | ||| | || ||
Sbjct 346209 GAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTC 346268
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || ||||||||||| | ||||||||| | | || |||||||| ||
Sbjct 346269 CTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTC 346328
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||| || | | | || | ||| ||||||||||| |||||
Sbjct 346329 GCTGATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGT 346388
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108
|| || || | ||||| | |||| |||||| |||
Sbjct 346389 CTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTTA 346425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153819159050481
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |