Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03-
09] 111 sequences; 9,274,942 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq29 138 3e-27
seq58 120 7e-22
seq47 109 1e-18
>seq29
Length=154453
Score = 138 bits (152), Expect = 3e-27
Identities = 162/217 (75%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||| | || ||||| |||||||| || |||||||||||||| |||
Sbjct 41872 AAAATGC---AGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAA 41816
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
| |||||||| ||| ||| || || ||| || || ||||| || |||||
Sbjct 41815 TCCAATGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCT 41756
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| ||||| ||||||||||| || |||||||| |||||||| | || || | ||
Sbjct 41755 GACCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGAC 41696
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131
|| ||| |||| ||||| || || || || |||| ||
Sbjct 41695 TACAACATCCAGAAAGAGTCCACTCTTCA-CTTGGTT 41660
>seq58
Length=350062
Score = 120 bits (132), Expect = 7e-22
Identities = 155/208 (75%), Gaps = 7/208 (3%)
Strand=Plus/Plus
Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971
|| ||||||| | |||||| | || || | || ||||| || || |||||||||||
Sbjct 20753 GTGAAAATGC---AGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTT 20809
Query 177972 GAAAGCTCA-GACACCATCGAGAACGTCAAACAAAAGATTCAG-GACAAAGAAGGAATCC 178029
| | || | |||||||||||| |||||| |||| |||| ||||| ||||| || |
Sbjct 20810 G-AGTCTAATGACACCATCGAGGCTGTCAAAAGCAAGA-TCAGCGACAAGGAAGGTATTC 20867
Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089
|||| |||||||| || | |||||||| || ||||||||||| ||||| | || |||
Sbjct 20868 CTCCTGACCAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTT 20927
Query 178090 CCGATTATAACGTCCAAAAAGAATCAAC 178117
| || || ||| |||| || || || ||
Sbjct 20928 CTGACTACAACATCCAGAAGGAGTCCAC 20955
>seq47
Length=387992
Score = 109 bits (120), Expect = 1e-18
Identities = 140/188 (74%), Gaps = 4/188 (2%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA-GACACCATCGAGAACGTCAAACA 178003
|| ||||| || ||||| || || ||||| || | || |||||||| || ||
Sbjct 346397 ACCGGAAAGACTATCACTCTTGAAGTGGAGT-CTAATGATACCATCGAAGCTGTGAAGAG 346339
Query 178004 AAAGATTCAG-GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| ||| ||||| ||||| || ||||| |||||||| || ||||||||||| || |
Sbjct 346338 CAAGAT-CAGCGACAAGGAAGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCA 346280
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| ||||| || || || | |||||| |||| |||||| |||| || || || || ||||
Sbjct 346279 AGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTATAACATCCAGAAGGAGTCCACTCTGC 346220
Query 178123 ATCTTGTT 178130
|| | |||
Sbjct 346219 ATTTGGTT 346212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203729488068534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |