Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq58 131 2e-25 seq47 125 7e-24 seq29 113 4e-20 >seq58 Length=350062 Score = 131 bits (144), Expect = 2e-25 Identities = 173/238 (73%), Gaps = 8/238 (3%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | ||||| || | ||| ||||||||| ||||| ||||| Sbjct 20989 ACCACCACCACGGAGACGAAGCACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTC 20930 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || |||||||| | || |||||||| || || ||||| |||| ||||| ||||| | Sbjct 20929 AGAAAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGG 20870 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT----CAACGACGACACAGTGTCGCTCG 41807 |||| | |||||||| |||| || |||| || | ||| ||||| | | Sbjct 20869 AGGAATACCTTCCTTGTCGCTGATCTT--GCTTTTGACAGCCTCGATG--GTGTCATTAG 20814 Query 41808 ACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| ||||| | || || || || ||||||| |||||||| |||||||||||| || Sbjct 20813 ACTCAACCTCGAGGGTAATAGTCTTTCCCGTCAACGTCTTTATGAAAATCTGCATTTT 20756 >seq47 Length=387992 Score = 125 bits (138), Expect = 7e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || | ||| | |||| |||||| ||| ||||||||| |||||||| ||||| Sbjct 346195 CCACCACGCAAACGGAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAA 346254 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||||||||| ||||| || || ||||| ||||| | ||| Sbjct 346255 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 346314 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||| |||| || ||||| | | || || | |||||||| Sbjct 346315 ATACCTTCCTTGTCGCTGATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACT 346374 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCG 41869 || | || || || || || |||| ||||| | || |||||||||||| || Sbjct 346375 TCAAGAGTGATAGTCTTTCCGGTCAAGGTCTTGATAAAGATCTGCATGTTAACG 346428 >seq29 Length=154453 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | |||| || || ||| ||| ||||| ||||| ||||| ||| Sbjct 41643 CCGCCACGAAGACGGAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAG 41702 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||| ||||| ||||| || || || |||||||| | ||| Sbjct 41703 AGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGA 41762 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||||| || | ||||| ||| | | | | ||||| | || || ||| Sbjct 41763 ATACCTTCCTTATCACTAATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACC 41822 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || | || || || || || || || ||||| | |||||||||||| || Sbjct 41823 TCGAGGGTGATAGTCTTTCCTGTTAGAGTCTTGATGAAAATCTGCATTTT 41872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303358553200