Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq66 288 1e-72 seq22 179 4e-40 >seq66 Length=396251 Score = 288 bits (318), Expect = 1e-72 Identities = 1365/2149 (64%), Gaps = 61/2149 (3%) Strand=Plus/Plus Query 52796 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 52855 |||| ||| | ||||| ||||| | || | ||||| | || || ||||| ||||| Sbjct 305849 TCCTGGTCAACCGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 305908 Query 52856 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACT 52914 || ||||| | ||| | ||| ||||| ||||||||||| || || || ||| | Sbjct 305909 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTT 305968 Query 52915 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 52974 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 305969 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 306027 Query 52975 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 53034 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 306028 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 306087 Query 53035 ATCTTCTGGAA-----GGTTTGTATTCTGAATAGATCCACCATCTACCATAATCCTATTC 53089 ||| | |||| | ||| || |||||| |||||| | | || | |||||| Sbjct 306088 ATCCTGAGGAATCGAGGCGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 306145 Query 53090 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 53149 || || ||||| ||||| | | || | | | || |||| |||||||| Sbjct 306146 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 306205 Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | | Sbjct 306206 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 306265 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | | Sbjct 306266 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGG 306325 Query 53270 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 53329 ||| | | ||| || | ||| | |||| | || ||||| | ||| | || Sbjct 306326 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 306385 Query 53330 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT-----C 53384 | ||| ||| | |||| | | | || || | | | Sbjct 306386 GTAGGTGTAACGCCCCAAAGA-----TCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 306440 Query 53385 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 53444 || | || || || || || || || || ||| | || | || || | || Sbjct 306441 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTG 306500 Query 53445 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 53504 | | ||| ||||| || || |||| |||| || ||||| || || || ||||| | Sbjct 306501 CATGATATATGGTCTCAAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAG 306560 Query 53505 GATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 53563 | | | | || | || || || ||||| || || | |||||| | | | || |||||| Sbjct 306561 GC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTA 306619 Query 53564 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 53623 || | | | || || ||| ||||| | ||| || ||||| |||| ||||||| | Sbjct 306620 TGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGA 306679 Query 53624 TTGAGGTTTCTGACAATTACTTTGACCACATCCTTCA---GTTTGAGAAAATCAA----- 53675 || | ||| || |||||| || || | || | |||| | || | Sbjct 306680 TTCAAGTTATAAGTGATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAACA 306739 Query 53676 --ATTGTCCAT---CTATTACAAA--CATGTTCAATGCAATAGATGCCAGATTACAAACG 53728 || ||| | || ||||||| || | | |||| || ||||||||||| || Sbjct 306740 CCATCATCCTTTGTCT-TTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACATACA 306796 Query 53729 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATG 53788 || || | || | | || | | || ||| ||| | |||| || |||||| Sbjct 306797 GCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATA 306856 Query 53789 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGC 53848 || || | ||| | ||||||||||| |||| | |||||||||||| ||||| || Sbjct 306857 GTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGGA 306916 Query 53849 GTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA 53908 |||| || ||| | || | ||| | ||| || | ||| | |||| || || || Sbjct 306917 TTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCAAAGCTTCTGAGCTTTGATGGTA 306976 Query 53909 GATTTGTATCTCTTTTCTCTTTCGT--ATA--GTGTATACAATCGTTCAAACTCGTCTCC 53964 | |||| | | | ||| ||| |||| || | ||| || || || || Sbjct 306977 C----GACGACCTTTACCCATACGTTCATAACGTGTGTAAAGCTCTTCGAATTCATCACC 307032 Query 53965 CCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC 54024 |||||| | | ||||| ||||| | ||||||||||| | ||||||||| ||| Sbjct 307033 ATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAGA 307092 Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084 ||| |||| ||||| || | ||||||||||||||||| | ||| ||||| | || | Sbjct 307093 CTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCACG 307152 Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144 ||| || || || || ||||| |||||||| ||| | | || |||| |||||| Sbjct 307153 GACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCCA 307212 Query 54145 CGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCT 54204 ||||| | || || | | | | || || |||||||| || |||||||| | || | Sbjct 307213 GGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAACG 307272 Query 54205 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCC 54264 ||| |||||||| | || | | |||||||| |||||| ||||||| ||| || || || Sbjct 307273 AGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTACC 307332 Query 54265 GGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCAT 54324 || ||| || ||| ||||||| ||||| || ||||| || || || || Sbjct 307333 GGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAGA 307392 Query 54325 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCAT 54384 |||||| || | || || ||||| |||||||| ||||| || ||| || || | Sbjct 307393 TTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTTT 307452 Query 54385 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 54444 |||| || || ||||| | |||||| | | ||| || ||||| | || || Sbjct 307453 CATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAGT 307512 Query 54445 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGAT-AGCTGAGT 54503 ||||||||||| || || | || | || | | | ||| || ||||| | || || Sbjct 307513 GGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAG- 307571 Query 54504 CTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC-- 54561 || | | ||| || || | || || | ||| | ||| ||||| || | ||| Sbjct 307572 GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTCGT 307631 Query 54562 -AACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 54620 ||| | || | |||||||||||| || | ||| ||||| ||||| || | Sbjct 307632 GAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAAGT 307688 Query 54621 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGT 54680 | |||||| || || || | |||| || | | | || || | | || || | Sbjct 307689 AATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTTCT 307748 Query 54681 TAACTACATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 54738 | || || | ||| | | ||| ||||| || || || || | ||| | || || Sbjct 307749 TGACGAC-TTCAT-GAACCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGGTT 307806 Query 54739 GACATAGTTAAATAAATCCTTCATCACTTCACT-AAATAGtttttttGTTTCTTTGTGTA 54797 |||||| | ||| ||||| | || | ||| ||| || | ||| || | ||||| | Sbjct 307807 AACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTGAA 307865 Query 54798 GATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG 54857 | || || | || || | || || |||| ||||| || |||||||| || || | Sbjct 307866 GGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCATAC 307925 Query 54858 TGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCC 54906 | || || |||| |||| || |||| | ||||| || || || || Sbjct 307926 TAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 307974 >seq22 Length=83673 Score = 179 bits (198), Expect = 4e-40 Identities = 489/743 (66%), Gaps = 13/743 (2%) Strand=Plus/Minus Query 23825 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 23884 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 17138 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 17079 Query 23885 ACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTT 23942 ||| | ||||| ||||| |||||||||||| | ||||||| ||||| || | || || Sbjct 17078 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 17019 Query 23943 TTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATT 24002 | | ||||| | | || |||||| || |||||||| | ||| ||||| | Sbjct 17018 CTGA--CCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAG 16961 Query 24003 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 24062 || |||||| || | || | || || | ||| | | | | || || |||||| Sbjct 16960 TCGGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATA 16901 Query 24063 GAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGA---TACAATAAA 24119 ||| || || || | |||| | | || | | | | ||| | | ||| Sbjct 16900 TCGACTGCTTCAGTAAGAATA---CGTTCTATAACAAAAGGTGCTGGTCTGTTCTCCAAA 16844 Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 || | | | | ||| ||||||||| || ||||||||||| | | ||| || ||| Sbjct 16843 TGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCG 16784 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 || || || | || ||||| |||||||||||||| ||||| || || | ||||| Sbjct 16783 TTACTGAAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAG 16724 Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCG 24299 ||||| || ||||||| || || || || || || || | |||| || | ||| Sbjct 16723 GATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTA 16664 Query 24300 GC--GCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356 || || |||| ||||| ||||||| | ||||||||| | | ||| || Sbjct 16663 GCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATC 16604 Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416 || || |||| ||| || | | ||| ||| | || || || || || ||||| Sbjct 16603 GTGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATA 16544 Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476 | ||||| |||||||| || |||||||| || || || || |||||||| || || Sbjct 16543 AGCAGACTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCAC 16484 Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536 | ||||| | || || || ||| || | | || || |||||||| || Sbjct 16483 TTGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATA 16424 Query 24537 CCGTCACTGGCTGCAAAAAACGC 24559 |||||||| || ||||||||||| Sbjct 16423 CCGTCACTAGCGGCAAAAAACGC 16401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721013699920