Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq34 127 2e-24 seq3 107 2e-18 seq23 95.1 1e-14 >seq34 Length=648589 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| || || ||||| || || |||||||| || | ||||| |||||| Sbjct 446334 CACCAAGTGAATAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTC 446393 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||||||| |||||| |||| | ||||||||| || ||||| || || |||||||| | Sbjct 446394 GAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCT 446453 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || ||| || |||| |||||| | ||| ||||||| ||| | || || Sbjct 446454 GATCTTGCTTTTGACAGCCTCGATGGTGTCATTAGACTCAACCTCGAGGGTAATAGTCTT 446513 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| || |||| ||||||||||| Sbjct 446514 TCCCGTCAACGTCTTTATGAAAATCTGCAT 446543 >seq3 Length=255871 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || |||||||| || |||||||| || | ||||| ||| || Sbjct 112793 ACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCA 112734 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| |||||| |||| ||||| || || || ||||| || || ||||| || || Sbjct 112733 AGCTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCACTA 112674 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || || || | |||||| || || ||||||| ||| | || || Sbjct 112673 ATTTTGCTCTTTACGGCCTCAATGGTGTCATTGGATTCAACCTCGAGGGTGATAGTCTTT 112614 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || | ||||||||||| Sbjct 112613 CCTGTTAGAGTCTTGATGAAAATCTGCAT 112585 >seq23 Length=679897 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || ||||| || || ||||| || ||| | |||||| ||||| Sbjct 614894 ACCAAATGCAGAGTGGACTCCTTCTGGATGTTATACTCGGAAAGAGTGCGGCCGTCCTCA 614953 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||| ||||||||||| || ||||| || || |||||||| | Sbjct 614954 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCGCTG 615013 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || ||||| ||| || | ||| || || | || | || || Sbjct 615014 ATCTTGCTCTTCACAGCTTCGATGGTATCATTAGACTCCACTTCAAGAGTGATAGTCTTT 615073 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||||||| || || | ||| ||||||||| Sbjct 615074 CCGGTCAAGGTCTTGATAAAGATCTGCATG 615103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829982302668