Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq22 116 3e-21
>seq22
Length=83673
Score = 116 bits (128), Expect = 3e-21
Identities = 565/887 (64%), Gaps = 25/887 (3%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || || ||| | ||| || |||||||| || || || | |||||||||||
Sbjct 17119 TTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTTACCAGCCAATGAAATATTC 17060
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTA----TTTATCGCATCCCAATTCCAA 16059
||||| ||||| |||||||| ||| | ||| || || | ||||| | |
Sbjct 17059 TCCATGAAATCGAAAGGATTGGCG--ACATT-GTACACCTTGTTCTGA-CCCAAAGCTAC 17004
Query 16060 CAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTAT 16119
| | |||||| |||||||| || | |||||| |||||||| || ||||| || |
Sbjct 17003 GAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTCGGCATTCATACCGAG 16944
Query 16120 TAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGAT 16179
|| | ||||| | || ||| | || | | | || |||| || |||||| | |
Sbjct 16943 TAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATCGACTGCTTCAGTAAG 16884
Query 16180 TATATCTCTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTAAACATTATACAAGC 16239
||| | || ||| | | || ||| || || | | | | ||||||
Sbjct 16883 AATACGTTCTATAACAAAAGGTGCTGGTCTGTTCTCCAAATGGCTGTAAAGGAGACAAGC 16824
Query 16240 AAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGG 16299
||||| ||| | || ||||| | | || |||||||| || || | ||| ||
Sbjct 16823 GAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTTACTGAAGGTCAAACCCGG 16764
Query 16300 CATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACC 16359
||| || || || ||||| | ||| || ||||| ||||| || || || ||||| | |||
Sbjct 16763 CATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGGATCCTGAGAAGAAAACACC 16704
Query 16360 TTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct---at 16416
||||| || || ||||| || | ||||||| || | ||| || || ||
Sbjct 16703 CTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAA---CTAGCTTCCTCGTCAGTAAT 16647
Query 16417 ccattttttagcccaatttgctttttgtttAACA-CAGTTCATGTTCTCTATTGCATTAA 16475
||| |||||| || || || | | || ||| || | || |||| ||
Sbjct 16646 CCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGA-ATCGTGAAAATGGCATCAA 16588
Query 16476 ATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTT 16535
| | | | ||| || | || | ||||| || || || | ||| |||||||
Sbjct 16587 AAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAGCAGACTGTACATTT 16528
Query 16536 CTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTT 16595
| || ||||| |||||||| ||||| || || |||||||| | || || || ||
Sbjct 16527 CAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTTGGCCTCAGAGATAC 16468
Query 16596 GTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAA 16655
|| |||| ||||| | ||||| || || || || || || ||||| ||||
Sbjct 16467 CAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACCGTCACTAGCGGCAA 16408
Query 16656 AAAACGCAAGTATGTGTTTAATAA---AAtttttttCGTTA-TCTG--AAAGTTTTAACC 16709
||||||| || | || ||||| || || |||| | || | ||||| ||
Sbjct 16407 AAAACGCTAGAACTCGTGAAATAAAGTAACGTTCATCGTCATTCAGCCTAAGTT---CCC 16351
Query 16710 AGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCT 16769
|||| || ||| | | | ||| |||||||| ||||| |||||||| ||||||
Sbjct 16350 AGTCCTGAATATCCTGGGCCAGATCAACCTCTTCAGTTGTCCAGAAAGAAGCTTCAGCCT 16291
Query 16770 TTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACA 16816
||||| | ||| || ||||| | |||||||| | ||||
Sbjct 16290 GCTTATAAGCCTGCCAGATACTCTCGTACTCGATAGGAAAGAGAACA 16244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511543269400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |