Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq22 131 1e-25
seq3 95.1 1e-14
seq34 89.7 5e-13
seq23 86.0 6e-12
>seq22
Length=83673
Score = 131 bits (144), Expect = 1e-25
Identities = 405/618 (66%), Gaps = 13/618 (2%)
Strand=Plus/Plus
Query 57517 TTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGAC-ATTTGG 57575
||||| | ||||| || | | | ||||| | ||||| || || || | ||| || |||
Sbjct 16219 TTTTGAAGGAGAACCCTCATCGTTTTGTTCTCTTTCCTATCGAGTA-CGAGAGTATCTGG 16277
Query 57576 AACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAG 57635
| || || |||| ||||| || || ||||| ||||| || || ||| | ||
Sbjct 16278 CAGGCTTATAAGCAGGCTGAAGCTTCTTTCTGGACAACTGAAGAGGTTGATCTGGCCCAG 16337
Query 57636 GATCTGAGCGATTGGGA---TTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTG 57692
||| | || ||||| | || || || ||| | | |||||| || ||
Sbjct 16338 GATATTCAGGACTGGGAACTTAGGCTGAATGACGATGAACGTTACTTTATTTCACGAGTT 16397
Query 57693 TTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA 57752
| |||||||| ||||| || |||||||| || ||||| ||||| || || ||
Sbjct 16398 CTAGCGTTTTTTGCCGCTAGTGACGGTATTGTGAATGAGAACTTGGTTTCCAGGTT--CA 16455
Query 57753 CAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAA 57810
| || || | | ||||| | |||||||||||||| || | || || |
Sbjct 16456 GTACTGACGTTGGTATCTCTGAGGCCAAGTGCTTTTACGGATTCCAGATTATGATGGAGA 16515
Query 57811 ACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGA 57870
|| | || || |||||||| || || || || || ||||| ||||| ||| | | ||
Sbjct 16516 ACATTCACTCTGAAATGTACAGTCTGCTTATTGACACTTACGTCAAGGA-AACTAAG-GA 16573
Query 57871 AACGTAGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTG 57928
| | || || || | || || || || || || || |||||||| ||||
Sbjct 16574 ATCCCAGTTCCTTTTTGATGCCATTTTCACGATTCCTGCCATTCAGAAGAAGGCCAAGTG 16633
Query 57929 GTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGC 57988
| | | ||||| | || || | ||||| ||| | ||| |||| |||||
Sbjct 16634 GGCTCTTCGCTGGATTACTGACGAGGAAGCTAGTTTCGCTGAGCGACTAGTCGCATTCGC 16693
Query 57989 CGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACG 58048
|| || || ||| | ||||| || || |||||| || || || ||| | || || ||
Sbjct 16694 AGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAGCG 16753
Query 58049 CGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCA 58108
||||| ||||| || |||| || || ||||||||||| || || ||||||||||| ||
Sbjct 16754 TGGCCTTATGCCGGGTTTGACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCA 16813
Query 58109 TACTGATTTTGCGTGCCT 58126
||| ||||| || || ||
Sbjct 16814 TACCGATTTCGCTTGTCT 16831
>seq3
Length=255871
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||| | |||||||| ||||| || || |||||| |||| |||||| |
Sbjct 112582 AAAATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCC 112641
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|||| | || | || ||| || | ||| || |||||||| | || || ||
Sbjct 112642 AATGACACCATTGAGGCCGT-AAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGA 112700
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||| || ||||| || ||||||||||||||| | ||||| || | || ||
Sbjct 112701 CCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTA 112760
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || ||||| || |||||||| |||| ||
Sbjct 112761 CAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCT 112796
>seq34
Length=648589
Score = 89.7 bits (98), Expect = 5e-13
Identities = 118/160 (74%), Gaps = 4/160 (3%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||| ||||||| |||| || || || || ||| |||| ||||| |
Sbjct 446546 AAAATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCT 446487
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAG--AGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
|||| |||| | |||||| || ||| |||| |||||||||| | || || |
Sbjct 446486 AATGACACCATCGAGGCTGTCAAA-AGCAAGATCAGCG-ACAAGGAAGGTATTCCTCCTG 446429
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||||||||| | || |||||||| |||||| | || ||
Sbjct 446428 ACCAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGA 446389
>seq23
Length=679897
Score = 86.0 bits (94), Expect = 6e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|||||||| || || | ||||| |||| || || || ||||| | || || || |
Sbjct 615105 AACATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCT 615046
Query 31250 TCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|| | ||||| | || || | ||| |||| |||||||||| | || || ||
Sbjct 615045 AATGATACCATCGAAGCTGTGAAGAGCAAGATCAGCG-ACAAGGAAGGTATTCCTCCTGA 614987
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
|||||||||||| || ||||||||||| ||| | || ||| ||| | ||| ||
Sbjct 614986 CCAGCAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTA 614927
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||| || || || || ||||| ||| |||| ||
Sbjct 614926 TAACATCCAGAAGGAGTCCACTCTGCATTTGGTTCT 614891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765959805680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |