Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq22 131 1e-25 seq3 95.1 1e-14 seq34 89.7 5e-13 seq23 86.0 6e-12 >seq22 Length=83673 Score = 131 bits (144), Expect = 1e-25 Identities = 405/618 (66%), Gaps = 13/618 (2%) Strand=Plus/Plus Query 57517 TTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGAC-ATTTGG 57575 ||||| | ||||| || | | | ||||| | ||||| || || || | ||| || ||| Sbjct 16219 TTTTGAAGGAGAACCCTCATCGTTTTGTTCTCTTTCCTATCGAGTA-CGAGAGTATCTGG 16277 Query 57576 AACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAG 57635 | || || |||| ||||| || || ||||| ||||| || || ||| | || Sbjct 16278 CAGGCTTATAAGCAGGCTGAAGCTTCTTTCTGGACAACTGAAGAGGTTGATCTGGCCCAG 16337 Query 57636 GATCTGAGCGATTGGGA---TTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTG 57692 ||| | || ||||| | || || || ||| | | |||||| || || Sbjct 16338 GATATTCAGGACTGGGAACTTAGGCTGAATGACGATGAACGTTACTTTATTTCACGAGTT 16397 Query 57693 TTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA 57752 | |||||||| ||||| || |||||||| || ||||| ||||| || || || Sbjct 16398 CTAGCGTTTTTTGCCGCTAGTGACGGTATTGTGAATGAGAACTTGGTTTCCAGGTT--CA 16455 Query 57753 CAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAA 57810 | || || | | ||||| | |||||||||||||| || | || || | Sbjct 16456 GTACTGACGTTGGTATCTCTGAGGCCAAGTGCTTTTACGGATTCCAGATTATGATGGAGA 16515 Query 57811 ACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGA 57870 || | || || |||||||| || || || || || ||||| ||||| ||| | | || Sbjct 16516 ACATTCACTCTGAAATGTACAGTCTGCTTATTGACACTTACGTCAAGGA-AACTAAG-GA 16573 Query 57871 AACGTAGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTG 57928 | | || || || | || || || || || || || |||||||| |||| Sbjct 16574 ATCCCAGTTCCTTTTTGATGCCATTTTCACGATTCCTGCCATTCAGAAGAAGGCCAAGTG 16633 Query 57929 GTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGC 57988 | | | ||||| | || || | ||||| ||| | ||| |||| ||||| Sbjct 16634 GGCTCTTCGCTGGATTACTGACGAGGAAGCTAGTTTCGCTGAGCGACTAGTCGCATTCGC 16693 Query 57989 CGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACG 58048 || || || ||| | ||||| || || |||||| || || || ||| | || || || Sbjct 16694 AGCTGTTGAGGGTGTTTTCTTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAGCG 16753 Query 58049 CGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCA 58108 ||||| ||||| || |||| || || ||||||||||| || || ||||||||||| || Sbjct 16754 TGGCCTTATGCCGGGTTTGACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCA 16813 Query 58109 TACTGATTTTGCGTGCCT 58126 ||| ||||| || || || Sbjct 16814 TACCGATTTCGCTTGTCT 16831 >seq3 Length=255871 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||| | |||||||| ||||| || || |||||| |||| |||||| | Sbjct 112582 AAAATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCC 112641 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 |||| | || | || ||| || | ||| || |||||||| | || || || Sbjct 112642 AATGACACCATTGAGGCCGT-AAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGA 112700 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||| || ||||| || ||||||||||||||| | ||||| || | || || Sbjct 112701 CCAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTA 112760 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || ||||| || |||||||| |||| || Sbjct 112761 CAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCT 112796 >seq34 Length=648589 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||| ||||||| |||| || || || || ||| |||| ||||| | Sbjct 446546 AAAATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCT 446487 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAG--AGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 |||| |||| | |||||| || ||| |||| |||||||||| | || || | Sbjct 446486 AATGACACCATCGAGGCTGTCAAA-AGCAAGATCAGCG-ACAAGGAAGGTATTCCTCCTG 446429 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||||| | || |||||||| |||||| | || || Sbjct 446428 ACCAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGA 446389 >seq23 Length=679897 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| || || | ||||| |||| || || || ||||| | || || || | Sbjct 615105 AACATGCAGATCTTTATCAAGACCTTGACCGGAAAGACTATCACTCTTGAAGTGGAGTCT 615046 Query 31250 TCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || | ||||| | || || | ||| |||| |||||||||| | || || || Sbjct 615045 AATGATACCATCGAAGCTGTGAAGAGCAAGATCAGCG-ACAAGGAAGGTATTCCTCCTGA 614987 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || ||||||||||| ||| | || ||| ||| | ||| || Sbjct 614986 CCAGCAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGAGTA 614927 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || || || ||||| ||| |||| || Sbjct 614926 TAACATCCAGAAGGAGTCCACTCTGCATTTGGTTCT 614891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765959805680