Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq66 318 7e-82 seq22 181 1e-40 >seq66 Length=396251 Score = 318 bits (352), Expect = 7e-82 Identities = 1379/2153 (64%), Gaps = 69/2153 (3%) Strand=Plus/Plus Query 62034 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62093 |||| ||| | ||||| ||||| | || | ||||| | || || ||||| ||||| Sbjct 305849 TCCTGGTCAACCGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 305908 Query 62094 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 62152 || ||||| | ||| | ||| ||||| ||||||||||| || || || ||| | Sbjct 305909 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTT 305968 Query 62153 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62212 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 305969 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 306027 Query 62213 AGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 62272 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 306028 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 306087 Query 62273 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTACCATAATCCTATTC 62327 ||| | |||| | ||| || ||| || |||||| | | || | |||||| Sbjct 306088 ATCCTGAGGAATCGAGGCGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 306145 Query 62328 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACT 62387 || || ||||| ||||| | | || | | | || |||| || ||||| Sbjct 306146 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 306205 Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 | ||||||||| |||| ||| ||||| | || ||| | || ||| | || || | Sbjct 306206 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 306265 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | | Sbjct 306266 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGG 306325 Query 62508 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCC 62567 ||| | | ||| || | ||| | |||| | | ||||| | ||| | || Sbjct 306326 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 306385 Query 62568 GACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGAT-----C 62622 | ||| ||| | || |||| | | | || || | | | Sbjct 306386 GTAGGTGTAAC-----GCCCCAAAGATCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 306440 Query 62623 CTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTT---TACAACTCGCCTCTAATG 62679 || | || || ||||| || || || || ||| | | || || || || | | Sbjct 306441 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAA---GCTTCAACAG 306497 Query 62680 CACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAA 62739 | | | ||| ||||| ||||| |||| |||| || ||||| || || || |||| Sbjct 306498 CTGCATGATATATGGTCTCAAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAA 306557 Query 62740 ATGGATAATTTAAG-AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62798 | || | | | || | || || || || || || || | |||||| | | | || ||| Sbjct 306558 AAGGC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGT 306616 Query 62799 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62858 ||||| | | | || || ||| ||||| | ||| || ||||| |||| |||||| Sbjct 306617 CTATGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATT 306676 Query 62859 TTATTGAGATTTCTGACAATTAC-TTTGACCACATCCTTCA---GTTTGAGAAAATCAA- 62913 | ||| | | || | | || |||||| || || | || | |||| | || | Sbjct 306677 TGATTCA-AGTTATAAGTGATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAG 306735 Query 62914 ATCGCC--CATCTATT------ACAAA--CATGTTCAATGCAACAGATGCCAGATTACAC 62963 | | || |||| || ||||| || | | ||||| || ||||||||||| Sbjct 306736 AACACCATCATCCTTTGTCTTTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACAT 306793 Query 62964 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 63023 || || || | || | | || | | || ||| ||| | |||| || |||| Sbjct 306794 ACAGCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTG 306853 Query 63024 ATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 63083 ||||| || | ||| | ||||||||||| |||| | |||||||||||| ||||| Sbjct 306854 ATAGTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAA 306913 Query 63084 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 63142 ||| |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || Sbjct 306914 GGATTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCAAA-GCTTCTGAGCTTTGAT 306972 Query 63143 TATA----GATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGT 63198 || || | || | | | | ||| || | || || | |||||| || | Sbjct 306973 GGTACGACGACCTTTACC--CATACG--TTCATAACGTGTGTAAAGCTCTTCGAATTCAT 307028 Query 63199 CTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63258 | || |||||| | | | ||| ||||| | ||||||||||| | ||||||||| | Sbjct 307029 CACCATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCAT 307088 Query 63259 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318 || ||| |||| ||||| || | ||||||||||||||||| | ||| ||||| | | Sbjct 307089 CAGACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGG 307148 Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378 | ||| || || || || ||||| |||||||| ||| | | || |||| || Sbjct 307149 CACGGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCAT 307208 Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438 |||| ||||| | || || || | | | || || |||||||| || |||||||| | | Sbjct 307209 GCCAGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACAT 307268 Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498 | | ||| |||||||| | || | | |||||||| ||||||||| ||| |||| || | Sbjct 307269 AACGAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAG 307328 Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63558 |||||| ||| || ||| ||||||| ||||| || ||||| || || || | Sbjct 307329 TACCGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAG 307388 Query 63559 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCAT 63618 | |||||| || | || || ||||| || ||||| ||||| || || || | Sbjct 307389 CAGATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGT 307448 Query 63619 CGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATA 63678 | ||||| || || ||||| | |||||| | | | ||| || ||||| | | Sbjct 307449 CTTTCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACA 307508 Query 63679 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCT 63737 | || ||||||||||| || || | || | || | | | ||| || || || | || Sbjct 307509 AAGTGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCT 307568 Query 63738 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63797 || || | | ||| || || | || || | ||| | ||| ||||| || | | Sbjct 307569 TAG-GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGT 307627 Query 63798 TC---AACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63854 || ||||| || | ||||| |||||| || | ||| ||||| ||||| Sbjct 307628 TCGTGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCG 307684 Query 63855 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATAT 63914 || || |||||| || || || | |||| || | | || || | | | || Sbjct 307685 AAGTAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGC 307744 Query 63915 TTGTTAACTATATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAG 63972 || || || | | ||| | | ||| ||||| || || || || | ||| | | Sbjct 307745 TTCTTGACGA-CTTCAT-GAACCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGG 307802 Query 63973 GATTAACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCCTTG 64031 | ||||||||| || ||| |||||| | || | ||| ||| || | ||| || | |||| Sbjct 307803 GGTTAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTG 307861 Query 64032 TGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTA 64091 || || || || || || || | || || |||| ||||| || |||||||| || || Sbjct 307862 TGAAGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTC 307921 Query 64092 CAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 64144 | | || || |||| ||||| || |||| | ||||| || || || || Sbjct 307922 ATACTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 307974 >seq22 Length=83673 Score = 181 bits (200), Expect = 1e-40 Identities = 489/742 (66%), Gaps = 11/742 (1%) Strand=Plus/Minus Query 33272 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 33331 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 17138 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 17079 Query 33332 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAttttttt 33391 || ||||||| ||||| ||||||||||| || ||||||| |||||||| | || || Sbjct 17078 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 17019 Query 33392 AAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTC 33451 ||||| | | || |||||| || || || || | ||| ||||| | || Sbjct 17018 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 16959 Query 33452 ACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGA 33511 |||||| || | || | || || | ||| | | | | || || ||||| Sbjct 16958 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 16899 Query 33512 TACCGCATTTGTTATAATAAAT-CTAACGGTTTCTTCACTCGGTGGA-TGTAAT--AAAT 33567 || || | || | |||| | ||| | | | | ||| ||| | |||| Sbjct 16898 GACTGCTTCAGTAAGAATACGTTCTA----TAACAAAAGGTGCTGGTCTGTTCTCCAAAT 16843 Query 33568 GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGT 33627 | | | | | ||| ||||||||| || ||||||||||| | | ||| || |||| Sbjct 16842 GGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGT 16783 Query 33628 TAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATG 33687 || || || | || ||||| |||||||||||||| ||||| || || | ||| || | Sbjct 16782 TACTGAAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGG 16723 Query 33688 ATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG 33747 |||| || ||||| | || || || || || || || | |||| ||| | ||| | Sbjct 16722 ATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAG 16663 Query 33748 C--GCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33804 | || |||| ||||| ||||||| | ||||||||| | | ||| |||| Sbjct 16662 CTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCG 16603 Query 33805 TTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA 33864 | ||||||| ||| || | | ||| ||| | || || || ||||| || || | Sbjct 16602 TGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAA 16543 Query 33865 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATC 33924 ||||| |||||||| || |||||||| || || ||||| |||||||| || || Sbjct 16542 GCAGACTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACT 16483 Query 33925 TAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 33984 | ||||| | || || || |||| || | | || || |||||||| || | Sbjct 16482 TGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATAC 16423 Query 33985 CATCACTGGCTGCAAAAAACGC 34006 | ||||| || ||||||||||| Sbjct 16422 CGTCACTAGCGGCAAAAAACGC 16401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816978055120