Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq66 318 7e-82
seq22 181 1e-40
>seq66
Length=396251
Score = 318 bits (352), Expect = 7e-82
Identities = 1379/2153 (64%), Gaps = 69/2153 (3%)
Strand=Plus/Plus
Query 62034 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62093
|||| ||| | ||||| ||||| | || | ||||| | || || ||||| |||||
Sbjct 305849 TCCTGGTCAACCGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 305908
Query 62094 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 62152
|| ||||| | ||| | ||| ||||| ||||||||||| || || || ||| |
Sbjct 305909 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTT 305968
Query 62153 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62212
|| |||| || | ||||||| | ||||| || || ||||| | || | | ||
Sbjct 305969 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 306027
Query 62213 AGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 62272
|||||| | || || ||||| || |||||||| | || || || | ||||||
Sbjct 306028 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 306087
Query 62273 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTACCATAATCCTATTC 62327
||| | |||| | ||| || ||| || |||||| | | || | ||||||
Sbjct 306088 ATCCTGAGGAATCGAGGCGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 306145
Query 62328 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACT 62387
|| || ||||| ||||| | | || | | | || |||| || |||||
Sbjct 306146 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 306205
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
| ||||||||| |||| ||| ||||| | || ||| | || ||| | || || |
Sbjct 306206 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 306265
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
| ||||| | || || ||||||| ||| || ||||| ||||||||||| || | |
Sbjct 306266 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGG 306325
Query 62508 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCC 62567
||| | | ||| || | ||| | |||| | | ||||| | ||| | ||
Sbjct 306326 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 306385
Query 62568 GACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGAT-----C 62622
| ||| ||| | || |||| | | | || || | | |
Sbjct 306386 GTAGGTGTAAC-----GCCCCAAAGATCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 306440
Query 62623 CTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTT---TACAACTCGCCTCTAATG 62679
|| | || || ||||| || || || || ||| | | || || || || | |
Sbjct 306441 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAA---GCTTCAACAG 306497
Query 62680 CACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAA 62739
| | | ||| ||||| ||||| |||| |||| || ||||| || || || ||||
Sbjct 306498 CTGCATGATATATGGTCTCAAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAA 306557
Query 62740 ATGGATAATTTAAG-AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62798
| || | | | || | || || || || || || || | |||||| | | | || |||
Sbjct 306558 AAGGC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGT 306616
Query 62799 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62858
||||| | | | || || ||| ||||| | ||| || ||||| |||| ||||||
Sbjct 306617 CTATGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATT 306676
Query 62859 TTATTGAGATTTCTGACAATTAC-TTTGACCACATCCTTCA---GTTTGAGAAAATCAA- 62913
| ||| | | || | | || |||||| || || | || | |||| | || |
Sbjct 306677 TGATTCA-AGTTATAAGTGATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAG 306735
Query 62914 ATCGCC--CATCTATT------ACAAA--CATGTTCAATGCAACAGATGCCAGATTACAC 62963
| | || |||| || ||||| || | | ||||| || |||||||||||
Sbjct 306736 AACACCATCATCCTTTGTCTTTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACAT 306793
Query 62964 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 63023
|| || || | || | | || | | || ||| ||| | |||| || ||||
Sbjct 306794 ACAGCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTG 306853
Query 63024 ATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 63083
||||| || | ||| | ||||||||||| |||| | |||||||||||| |||||
Sbjct 306854 ATAGTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAA 306913
Query 63084 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 63142
||| |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || ||
Sbjct 306914 GGATTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCAAA-GCTTCTGAGCTTTGAT 306972
Query 63143 TATA----GATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGT 63198
|| || | || | | | | ||| || | || || | |||||| || |
Sbjct 306973 GGTACGACGACCTTTACC--CATACG--TTCATAACGTGTGTAAAGCTCTTCGAATTCAT 307028
Query 63199 CTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63258
| || |||||| | | | ||| ||||| | ||||||||||| | ||||||||| |
Sbjct 307029 CACCATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCAT 307088
Query 63259 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318
|| ||| |||| ||||| || | ||||||||||||||||| | ||| ||||| | |
Sbjct 307089 CAGACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGG 307148
Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378
| ||| || || || || ||||| |||||||| ||| | | || |||| ||
Sbjct 307149 CACGGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCAT 307208
Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438
|||| ||||| | || || || | | | || || |||||||| || |||||||| | |
Sbjct 307209 GCCAGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACAT 307268
Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498
| | ||| |||||||| | || | | |||||||| ||||||||| ||| |||| || |
Sbjct 307269 AACGAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAG 307328
Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63558
|||||| ||| || ||| ||||||| ||||| || ||||| || || || |
Sbjct 307329 TACCGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAG 307388
Query 63559 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCAT 63618
| |||||| || | || || ||||| || ||||| ||||| || || || |
Sbjct 307389 CAGATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGT 307448
Query 63619 CGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATA 63678
| ||||| || || ||||| | |||||| | | | ||| || ||||| | |
Sbjct 307449 CTTTCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACA 307508
Query 63679 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCT 63737
| || ||||||||||| || || | || | || | | | ||| || || || | ||
Sbjct 307509 AAGTGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCT 307568
Query 63738 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63797
|| || | | ||| || || | || || | ||| | ||| ||||| || | |
Sbjct 307569 TAG-GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGT 307627
Query 63798 TC---AACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63854
|| ||||| || | ||||| |||||| || | ||| ||||| |||||
Sbjct 307628 TCGTGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCG 307684
Query 63855 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATAT 63914
|| || |||||| || || || | |||| || | | || || | | | ||
Sbjct 307685 AAGTAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGC 307744
Query 63915 TTGTTAACTATATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAG 63972
|| || || | | ||| | | ||| ||||| || || || || | ||| | |
Sbjct 307745 TTCTTGACGA-CTTCAT-GAACCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGG 307802
Query 63973 GATTAACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCCTTG 64031
| ||||||||| || ||| |||||| | || | ||| ||| || | ||| || | ||||
Sbjct 307803 GGTTAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTG 307861
Query 64032 TGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTA 64091
|| || || || || || || | || || |||| ||||| || |||||||| || ||
Sbjct 307862 TGAAGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTC 307921
Query 64092 CAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 64144
| | || || |||| ||||| || |||| | ||||| || || || ||
Sbjct 307922 ATACTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 307974
>seq22
Length=83673
Score = 181 bits (200), Expect = 1e-40
Identities = 489/742 (66%), Gaps = 11/742 (1%)
Strand=Plus/Minus
Query 33272 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 33331
|| ||||||||| || |||||||| || ||||| || ||||| ||||| || ||
Sbjct 17138 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 17079
Query 33332 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAttttttt 33391
|| ||||||| ||||| ||||||||||| || ||||||| |||||||| | || ||
Sbjct 17078 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 17019
Query 33392 AAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTC 33451
||||| | | || |||||| || || || || | ||| ||||| | ||
Sbjct 17018 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 16959
Query 33452 ACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGA 33511
|||||| || | || | || || | ||| | | | | || || |||||
Sbjct 16958 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 16899
Query 33512 TACCGCATTTGTTATAATAAAT-CTAACGGTTTCTTCACTCGGTGGA-TGTAAT--AAAT 33567
|| || | || | |||| | ||| | | | | ||| ||| | ||||
Sbjct 16898 GACTGCTTCAGTAAGAATACGTTCTA----TAACAAAAGGTGCTGGTCTGTTCTCCAAAT 16843
Query 33568 GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGT 33627
| | | | | ||| ||||||||| || ||||||||||| | | ||| || ||||
Sbjct 16842 GGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGT 16783
Query 33628 TAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATG 33687
|| || || | || ||||| |||||||||||||| ||||| || || | ||| || |
Sbjct 16782 TACTGAAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGG 16723
Query 33688 ATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG 33747
|||| || ||||| | || || || || || || || | |||| ||| | ||| |
Sbjct 16722 ATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAG 16663
Query 33748 C--GCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33804
| || |||| ||||| ||||||| | ||||||||| | | ||| ||||
Sbjct 16662 CTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCG 16603
Query 33805 TTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA 33864
| ||||||| ||| || | | ||| ||| | || || || ||||| || || |
Sbjct 16602 TGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAA 16543
Query 33865 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATC 33924
||||| |||||||| || |||||||| || || ||||| |||||||| || ||
Sbjct 16542 GCAGACTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACT 16483
Query 33925 TAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 33984
| ||||| | || || || |||| || | | || || |||||||| || |
Sbjct 16482 TGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATAC 16423
Query 33985 CATCACTGGCTGCAAAAAACGC 34006
| ||||| || |||||||||||
Sbjct 16422 CGTCACTAGCGGCAAAAAACGC 16401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816978055120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |