Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq66 318 8e-82 seq22 183 4e-41 >seq66 Length=396251 Score = 318 bits (352), Expect = 8e-82 Identities = 1376/2151 (64%), Gaps = 65/2151 (3%) Strand=Plus/Plus Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886 |||| ||| | ||||| ||||| | || | ||||| | || || ||||| ||||| Sbjct 305849 TCCTGGTCAACCGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 305908 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 64945 || ||||| | ||| | ||| ||||| ||||||||||| || || || ||| | Sbjct 305909 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTT 305968 Query 64946 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 65005 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 305969 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 306027 Query 65006 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 65065 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 306028 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 306087 Query 65066 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTC 65120 ||| | |||| | ||| || ||| || |||||| ||| || | |||||| Sbjct 306088 ATCCTGAGGAATCGAGGCGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 306145 Query 65121 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 65180 || || ||||| ||||| | | || | | | || |||| |||||||| Sbjct 306146 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 306205 Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | | Sbjct 306206 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 306265 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | | Sbjct 306266 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGG 306325 Query 65301 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 65360 ||| | | ||| || | ||| | |||| | || ||||| | ||| | || Sbjct 306326 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 306385 Query 65361 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT-----C 65415 | ||| ||| | |||| | | | || || | | | Sbjct 306386 GTAGGTGTAACGCCCCAAAGA-----TCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 306440 Query 65416 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 65475 || | || || || || || || || || ||| | || | || || | || Sbjct 306441 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTG 306500 Query 65476 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 65535 | | ||| ||||| || || |||| |||| || ||||| || || || ||||| | Sbjct 306501 CATGATATATGGTCTCAAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAG 306560 Query 65536 GATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 65594 | | | | || | || || || ||||| || || | |||||| | | | || |||||| Sbjct 306561 GC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTA 306619 Query 65595 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 65654 || | | | || || ||| ||||| | ||| || ||||| |||| ||||||| | Sbjct 306620 TGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGA 306679 Query 65655 TTGAGATTTCTGACAATTAC-TTTGACCACATCCTTCA---GTTTGA---------GAAA 65701 || | | || | | || |||||| || || | || | |||| ||| Sbjct 306680 TTCA-AGTTATAAGTGATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAAC 306738 Query 65702 ATCAA-ATCGCTCATCTATTACAAA--CATGTTCAATGCAACAGATGCCAGATTACAAAC 65758 | || ||| | ||| ||||||| || | | ||||| || ||||||||||| || Sbjct 306739 ACCATCATCCTTTGTCT-TTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACATAC 306795 Query 65759 GGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGAT 65818 || || | || | | || | | || ||| ||| | |||| || |||||| Sbjct 306796 AGCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGAT 306855 Query 65819 GGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGG 65878 || || | ||| | ||||||||||| |||| | |||||||||||| ||||| || Sbjct 306856 AGTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGG 306915 Query 65879 AGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTA 65937 | |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || Sbjct 306916 ATTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCAAA-GCTTCTGAGCTTTGATGG 306974 Query 65938 TAGATTTGTATCTCTTTTCTCTTTCGT--ATA--GTGTATACAATCGTTCGAACTCGTCT 65993 || | |||| | | | ||| ||| |||| || | |||||| || || Sbjct 306975 TAC----GACGACCTTTACCCATACGTTCATAACGTGTGTAAAGCTCTTCGAATTCATCA 307030 Query 65994 CCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCA 66053 || |||||| | | ||||| ||||| | ||||||||||| | ||||||||| ||| Sbjct 307031 CCATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCA 307090 Query 66054 TCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTT 66113 ||| |||| ||||| || | ||||||||||||||||| | ||| | ||| | || Sbjct 307091 GACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCA 307150 Query 66114 CTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGC 66173 | ||| || || || || ||||| |||||||| ||| | | || ||||| |||| Sbjct 307151 CGGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGC 307210 Query 66174 CACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTAT 66233 || ||||| | || || || | | | || || |||||||| || |||||||| | || Sbjct 307211 CAGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAA 307270 Query 66234 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTC 66293 | ||| |||||||| | || | | |||||||| |||||| ||||||||||| || || Sbjct 307271 CGAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTA 307330 Query 66294 CCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCC 66353 |||| ||| || ||| | ||||| ||||| || ||||| || || || || Sbjct 307331 CCGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCA 307390 Query 66354 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCC 66413 |||||| || | || || ||||| |||||||| ||||| || ||| || || Sbjct 307391 GATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCT 307450 Query 66414 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 66473 ||||| || || ||||| | |||||| | | ||| || ||||| | || Sbjct 307451 TTCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAA 307510 Query 66474 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCTGA 66532 || ||||||||||| || || | || | || | | | ||| || || || | || | Sbjct 307511 GTGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTA 307570 Query 66533 GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 66592 | || | | ||| || || | || || | ||| | ||| ||||| || | ||| Sbjct 307571 G-GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTC 307629 Query 66593 ---AACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649 ||| | || | ||||| |||||| || | ||| ||||| ||||| || Sbjct 307630 GTGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAA 307686 Query 66650 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 66709 || |||||| || || || | |||| || | | | || || | | || || Sbjct 307687 GTAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTT 307746 Query 66710 GTTAACTACATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGA 66767 || || || | ||| | | ||| ||||| || || || || | ||| | || Sbjct 307747 CTTGACGAC-TTCAT-GAACCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGG 307804 Query 66768 TTGACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCTTTGTG 66826 || |||||| || ||| |||||| | || | ||| ||| || | ||| || | ||||| Sbjct 307805 TTAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTG 307863 Query 66827 TAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACA 66886 || || || | || || | || || | || ||||| || |||||||| || || Sbjct 307864 AAGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCAT 307923 Query 66887 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 66937 | | || || |||| ||||| || |||| | ||||| || || || || Sbjct 307924 ACTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 307974 >seq22 Length=83673 Score = 183 bits (202), Expect = 4e-41 Identities = 489/744 (66%), Gaps = 15/744 (2%) Strand=Plus/Minus Query 35848 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 35907 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 17138 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 17079 Query 35908 ACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAttttttt 35967 ||| | ||||| ||||| |||||||||||||| |||||| ||||| || | || || Sbjct 17078 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 17019 Query 35968 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTC 36027 ||||| | | || |||||| || ||||| || | ||| ||||| | || Sbjct 17018 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 16959 Query 36028 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 36087 |||||| || | || | || || | ||| | | | | || || |||||| Sbjct 16958 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 16899 Query 36088 GACCGCGTCTGTTATAATAGAT---ATTACT---GTTTCTTCACTCGGTGGATACAATAA 36141 ||| || || || | |||| | || || | | || ||| | | || Sbjct 16898 GACTGCTTCAGTAAGAATACGTTCTATAACAAAAGGTGCT------GGTCTGTTCTCCAA 16845 Query 36142 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTC 36201 ||| | | | | ||| ||||||||| || ||||||||||| | | ||| || || Sbjct 16844 ATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTC 16785 Query 36202 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 36261 ||| || || | || ||||| |||||||||||||| ||||| || || | ||||| Sbjct 16784 GTTACTGAAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAA 16725 Query 36262 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC 36321 ||||| || ||||||| || || || || || || || | |||| ||| | ||| Sbjct 16724 GGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACT 16665 Query 36322 GGC--ACT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 36378 || || |||| ||||| ||||||| | ||||||||| | | ||| || Sbjct 16664 AGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAAT 16605 Query 36379 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 36438 || || |||| ||| || | | ||| ||| | || || || || || ||||| Sbjct 16604 CGTGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAAT 16545 Query 36439 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACA 36498 | ||||| |||||||| || |||||||| || || || || |||||||| || || Sbjct 16544 AAGCAGACTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCA 16485 Query 36499 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 36558 | ||||| | || || || |||| || | | || || |||||||| || Sbjct 16484 CTTGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAAT 16425 Query 36559 TCCGTCACTGGCTGCAAAAAACGC 36582 |||||||| || ||||||||||| Sbjct 16424 ACCGTCACTAGCGGCAAAAAACGC 16401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172150054360