Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq66 385 7e-102 seq22 192 8e-44 >seq66 Length=396251 Score = 385 bits (426), Expect = 7e-102 Identities = 1393/2152 (65%), Gaps = 67/2152 (3%) Strand=Plus/Plus Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765 |||| ||| | ||||| ||||| | || | ||||| | || || ||||| ||||| Sbjct 305849 TCCTGGTCAACCGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 305908 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACT 78824 || ||||| | ||| | ||| ||||||||||||||||| || || || ||| | Sbjct 305909 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTT 305968 Query 78825 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 78884 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 305969 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 306027 Query 78885 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 78944 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 306028 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 306087 Query 78945 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTC 78999 ||| | |||| | ||| || ||| || |||||| ||| || | |||||| Sbjct 306088 ATCCTGAGGAATCGAGGCGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 306145 Query 79000 TTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 79059 || || || || ||||| | | || | | | || |||| |||||||| Sbjct 306146 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 306205 Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | Sbjct 306206 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 306265 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 ||||||| | || || ||||||| ||| || || || ||||||||||| || | | Sbjct 306266 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGG 306325 Query 79180 CTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCA 79239 ||| | | ||| || ||| | |||| | || ||||| ||||| | ||| Sbjct 306326 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 306385 Query 79240 GACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGAT--CCTG 79297 | || ||| ||||||||| || || ||| | ||| | || ||| Sbjct 306386 GTAGGTGTAACGCCCCAAAGATCGTAGGAAAGCTGACCTTCCGAAGC--AGGACTGCCTT 306443 Query 79298 TGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGT 79357 ||| || |||||||| || || | || | || | || || | ||| | | Sbjct 306444 CGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTGCAT 306503 Query 79358 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGAT 79417 ||| ||||| || || |||| |||| || ||||| || ||| || ||||| || Sbjct 306504 GATATATGGTCTCAAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAGGC- 306562 Query 79418 AATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 79476 | | | || | || || || ||||| || || | |||||| | | | || |||||||| Sbjct 306563 AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTATGA 306622 Query 79477 CTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 79536 | | | || ||| ||| ||||| | ||| || ||||| |||| ||||||| ||| Sbjct 306623 CGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGATTC 306682 Query 79537 AGATTCCTGACTATTAC-TTTGACCACATCCTTTA---GTTTGAGAAAATCAA------- 79585 | || | | | || |||||| || || | | | |||| | || | Sbjct 306683 AAGTTA-TAAGTGATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAACACC 306741 Query 79586 ATCGTCCAT---CTATTACAAA--CATGTTCAACGCGACAGATGCCAGATTACAAACGGC 79640 ||| ||| | || ||||||| || | | || || || ||||||||||| || || Sbjct 306742 ATCATCCTTTGTCT-TTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACATACAGC 306798 Query 79641 TACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGT 79700 || | || | | || | | |||||| ||| | ||| || ||| || || Sbjct 306799 AGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATAGT 306858 Query 79701 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGT 79760 || | ||| | ||||||||||| |||| | |||||||||||| ||||| ||| | Sbjct 306859 ACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGGATT 306918 Query 79761 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATA- 79818 ||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || || Sbjct 306919 ACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCAAA-GCTTCTGAGCTTTGATGGTAC 306977 Query 79819 ---GACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCC 79875 ||| | || | | | ||| || |||| || | |||||| || || || Sbjct 306978 GACGACCTTTACCCATA----CGTTCATAACGTGTGTAAAGCTCTTCGAATTCATCACCA 307033 Query 79876 CAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCC 79935 ||||||| | | ||||| ||||||| ||||||||||| | ||||||||||||| | Sbjct 307034 TAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAGAC 307093 Query 79936 TTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 79995 || |||| ||||| || | ||||||||||||||||| | ||| ||||| | || | Sbjct 307094 TTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCACGG 307153 Query 79996 TGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 80055 || || || || || ||||| |||||||| ||| | | || |||| |||||| Sbjct 307154 ACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCCAG 307213 Query 80056 GGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTA 80115 ||||| | || || || | | | || || |||||||| || |||||||| | || | | Sbjct 307214 GGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAACGA 307273 Query 80116 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCG 80175 || |||||||| | || | | |||||||| |||||| ||||||||||| || || ||| Sbjct 307274 GCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTACCG 307333 Query 80176 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 80235 | ||| || ||| ||||||| ||||| || ||||| || || || || | Sbjct 307334 GCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAGAT 307393 Query 80236 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATC 80295 ||||| || | || || ||||| |||||||| ||||| || || || || || Sbjct 307394 TTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTTTC 307453 Query 80296 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 80355 ||| || || ||||| | |||||| | | ||| || ||||| | || || Sbjct 307454 ATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAGTG 307513 Query 80356 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT-AGCT----G 80410 ||||||||||| || || | || | |||| | | ||| || || || | || | Sbjct 307514 GGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAGGG 307573 Query 80411 ATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTT 80470 || || | || ||| || || | || || | ||| | ||| ||||| || | || Sbjct 307574 ATGTTAAAACC-----ATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTT 307628 Query 80471 C---AACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAA 80527 | ||| | ||| | ||||| ||||||||| | ||| ||||| ||||| | Sbjct 307629 CGTGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGA 307685 Query 80528 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 80587 | || |||||| || || || | |||| || | | | || || | | || | Sbjct 307686 AGTAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCT 307745 Query 80588 TGTTAACTACATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGG 80645 | || || || | |||| | ||| ||||| || || || || | ||| | || Sbjct 307746 TCTTGACGAC-TTCATGAACCT-CTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGG 307803 Query 80646 ATTAACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCCTTGT 80704 ||||||||| || ||| |||||| | || | ||| ||| || | ||| || | ||||| Sbjct 307804 GTTAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGT 307862 Query 80705 GTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTAC 80764 | || || || | || || | || || | || ||||| || |||||||| || || Sbjct 307863 GAAGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCA 307922 Query 80765 AAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 80816 | | || || |||| ||||| || |||| | ||||| || || || || Sbjct 307923 TACTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 307974 >seq22 Length=83673 Score = 192 bits (212), Expect = 8e-44 Identities = 491/744 (66%), Gaps = 15/744 (2%) Strand=Plus/Minus Query 49650 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 49709 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 17138 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 17079 Query 49710 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttttt 49769 || ||||||| ||||| ||||||||||| || ||||||| ||||| || | || || Sbjct 17078 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 17019 Query 49770 AAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTC 49829 ||||| | | || |||||| || ||||| || | ||| ||||| | || Sbjct 17018 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 16959 Query 49830 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGA 49889 |||||| || | || | || || | ||| | | | | || || ||||| Sbjct 16958 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 16899 Query 49890 TACCGCATCTGTTATAATA-GATCTA-----ACGGTTTCTTCACTCGGTGGATGCAATAA 49943 || || || || | |||| | |||| | | | || ||| | | || Sbjct 16898 GACTGCTTCAGTAAGAATACGTTCTATAACAAAAGGTGCT------GGTCTGTTCTCCAA 16845 Query 49944 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTC 50003 ||| | | | | ||| ||||||||| || ||||||||||| | | ||| | || Sbjct 16844 ATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTC 16785 Query 50004 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 50063 ||| || || | || ||||| |||||||||||||| ||||| || || | ||||| Sbjct 16784 GTTACTGAAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAA 16725 Query 50064 TGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACT 50123 || || || ||||| | || || || || || || || || |||| ||| | |||| Sbjct 16724 GGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACT 16665 Query 50124 GGCG--CT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 50180 || || |||| ||||| ||||||| | ||||||||| | | ||| || Sbjct 16664 AGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAAT 16605 Query 50181 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 50240 ||| ||||||| ||| || | | ||| ||| | || || || ||||| || || Sbjct 16604 CGTGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAAT 16545 Query 50241 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 50300 | ||||| |||||||| || |||||||| || || ||||| |||||||| || || Sbjct 16544 AAGCAGACTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCA 16485 Query 50301 TCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTAT 50360 | ||||| | || || || |||| || | | | || || |||||||| || Sbjct 16484 CTTGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAAT 16425 Query 50361 TCCGTCACTGGCTGCAAAAAACGC 50384 |||||||| || ||||||||||| Sbjct 16424 ACCGTCACTAGCGGCAAAAAACGC 16401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268090709560