Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq66 309 4e-79 seq22 187 3e-42 >seq66 Length=396251 Score = 309 bits (342), Expect = 4e-79 Identities = 978/1494 (65%), Gaps = 44/1494 (3%) Strand=Plus/Plus Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCA 71493 ||| ||| ||| ||||| || || |||| |||| || ||||| || || || ||| Sbjct 306497 GCTGCATGATATATGGTCTCAAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCA 306556 Query 71494 AATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGG 71552 || || | | | || | || || || ||||| || || | ||| || | | | || || Sbjct 306557 AAAGGC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGG 306615 Query 71553 TCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 71612 ||| || | | | || ||| ||| ||||| | ||| || ||||| |||| ||||| Sbjct 306616 TCTATGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAAT 306675 Query 71613 TTTATTGAGATTTCTGACTATTAC-TTTGACCACATCCTTTA---GTTTGAGAAAATCAA 71668 || ||| | | || | | | || |||||| || || | | | |||| | || | Sbjct 306676 TTGATTCA-AGTTATAAGTGATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGA 306734 Query 71669 -------ATC-TCCCATCTATT-ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAA 71719 ||| ||| | | || ||||| | | ||||| || ||||||||||| | Sbjct 306735 GAACACCATCATCCTTTGTCTTTACAAAGGCAGGGAGAGCAACTGAAGCCAGATTACATA 306794 Query 71720 CGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGA 71779 | || || | || | | || | | |||||| ||| | |||| || ||||| Sbjct 306795 CAGCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGA 306854 Query 71780 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACG 71839 | || || | ||| | ||||||||||| |||| | |||||||||||| || || | Sbjct 306855 TAGTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAG 306914 Query 71840 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATT 71898 || |||| || ||| | |||| ||| | ||| || | ||| | | || |||| || || Sbjct 306915 GATTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCAAA-GCTTCTGAGCTTTGATG 306973 Query 71899 ATATTCTTGTATCTCTTTTCT--CTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTC 71956 || | | || | | | ||| || |||| || | |||||| || || | Sbjct 306974 GTA--CGACGACCTTTACCCATACGTTCATAACGTGTGTAAAGCTCTTCGAATTCATCAC 307031 Query 71957 CCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCAT 72016 | || ||| | | ||||| ||||| || ||||||||||||| ||||||||||||| Sbjct 307032 CATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAG 307091 Query 72017 CATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 72076 || |||| ||||| || | ||||||||||||||||| | ||| ||||| | || | Sbjct 307092 ACTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCAC 307151 Query 72077 TATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 72136 || || || || || ||||| |||||||| ||| | | || |||| ||||| Sbjct 307152 GGACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCC 307211 Query 72137 ACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATC 72196 | ||||| | || || || | | | || || |||||||| || |||||||| | || | Sbjct 307212 AGGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAAC 307271 Query 72197 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCC 72256 ||| |||||||| | || | | |||||||| |||||| ||||||| ||| || || | Sbjct 307272 GAGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTAC 307331 Query 72257 CGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCA 72316 ||| ||| || ||| ||||||| |||||| || ||||| || || || || Sbjct 307332 CGGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAG 307391 Query 72317 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 72376 |||||| || | || || ||||| |||||||| ||||| || ||| || || Sbjct 307392 ATTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTT 307451 Query 72377 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 72436 ||||| || || ||||| | |||||| | | ||| || ||||| | || | Sbjct 307452 TCATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAG 307511 Query 72437 TAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT-AGCT--- 72492 | ||||||||||| || || | || | |||| | | ||| || || || | || Sbjct 307512 TGGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAG 307571 Query 72493 -GATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCT 72551 ||| || | || ||| || || | || || | ||| | ||||||||| || | Sbjct 307572 GGATGTTAAAACC-----ATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACG 307626 Query 72552 TTC---AACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 72608 ||| ||| | ||| | ||||| |||||| || | ||| ||||| ||||| Sbjct 307627 TTCGTGAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACC 307683 Query 72609 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATA 72668 || || |||||| || || || | |||| || | | || || || | | || Sbjct 307684 GAAGTAATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATG 307743 Query 72669 TTTGTTAACTATATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTA 72726 || || || | | |||| | ||| ||||| || || || || | ||| | Sbjct 307744 CTTCTTGACGA-CTTCATGAACCT-CTTCAGAAATCATAGGTGAGTGACGATCGTTTCTG 307801 Query 72727 GGATTAACATAGTTGAATAAATCCTCCATCACTTCACT-AAATAGtttttttGTTTCCTT 72785 || ||||||||| || ||| |||||| | || | ||| ||| || | ||| || | ||| Sbjct 307802 GGGTTAACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTT 307860 Query 72786 GTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGT 72845 ||| || || || | || || | || || |||| ||||| || |||||||| || || Sbjct 307861 GTGAAGGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGT 307920 Query 72846 ACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 72899 | | || || |||| ||||| || |||| | ||||| || || || || Sbjct 307921 CATACTAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 307974 Score = 127 bits (140), Expect = 3e-24 Identities = 314/473 (66%), Gaps = 9/473 (2%) Strand=Plus/Plus Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848 |||| ||| | || |||||||| | | | |||||| | || || ||||| ||||| Sbjct 305849 TCCTGGTCAACCGTGAACTGAATAGCGGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 305908 Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAG-TTTGGAATAGCT 70907 || ||||| | ||| | ||| ||||| ||||||||||| || || || |||| | Sbjct 305909 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTACCCATAGTT 305968 Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967 || | || |||| |||||||| |||||| || || ||||| | || | | || Sbjct 305969 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 306027 Query 70968 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 71027 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 306028 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 306087 Query 71028 ATCTTCTGGAA-----GGTTTGTATTCTGAATGGATCCACCATCTGCAATAATCCTATTT 71082 ||| | |||| | ||| | | ||| || |||||| |||||| | ||||| Sbjct 306088 ATCCTGAGGAATCGAGGCGATGTCT--TTAATAGAACCACCACTTGCAATCAATCTATTC 306145 Query 71083 TTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACT 71142 || || || || ||||| | | || | | | || |||| |||||||| Sbjct 306146 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 306205 Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | Sbjct 306206 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 306265 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 71255 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || Sbjct 306266 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTAC 306318 >seq22 Length=83673 Score = 187 bits (206), Expect = 3e-42 Identities = 488/741 (66%), Gaps = 9/741 (1%) Strand=Plus/Minus Query 41755 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTT 41814 || ||||||||| || |||||||| || ||||| || ||||| ||||| ||||| Sbjct 17138 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 17079 Query 41815 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttttt 41874 || ||||||| ||||| ||||||||||| || ||||||| ||||| || | || || Sbjct 17078 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 17019 Query 41875 AAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTC 41934 ||||| | | || |||||| || | || || | ||| ||||| | || Sbjct 17018 CTGACCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAGTC 16959 Query 41935 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 41994 |||||| || | || | || || | ||| | | | | || || |||||| Sbjct 16958 GGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATATC 16899 Query 41995 GACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGA---TACAATAAATG 42051 ||| || || || | |||| | | || | | | | ||| | | ||||| Sbjct 16898 GACTGCTTCAGTAAGAATA---CGTTCTATAACAAAAGGTGCTGGTCTGTTCTCCAAATG 16842 Query 42052 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTT 42111 | | | | ||| ||||||||| || |||||||| || | | ||| || ||||| Sbjct 16841 GCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAACTCGTT 16782 Query 42112 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGA 42171 || || | || ||||| |||||||||||||| ||||| || |||| ||||| || Sbjct 16781 ACTGAAGGTCAAACCCGGCATAAGGCCACGCTTTTTGAGCCAGAAAATAGCAGCAAAGGA 16722 Query 42172 TCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 42231 ||| || ||||| | || || || || || || || | |||| ||| | ||| || Sbjct 16721 TCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCGACTAGTCGCTCAGCGAAACTAGC 16662 Query 42232 --ACT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 42288 || |||| ||||| ||||||| | ||||||||| | | ||| ||||| Sbjct 16661 TTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGAATCGT 16602 Query 42289 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAA 42348 ||||||| ||| || | | ||| ||| | || || || || || || || | Sbjct 16601 GAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCAATAAG 16542 Query 42349 AAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 42408 ||||| |||||||| || |||||||| || || ||||| |||||||| || || | Sbjct 16541 CAGACTGTACATTTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAGCACTT 16482 Query 42409 GGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCC 42468 |||||| | | || || |||| || | | | || || || ||||| || || Sbjct 16481 GGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACAATACC 16422 Query 42469 GTCACTGGCTGCAAAAAACGC 42489 |||||| || ||||||||||| Sbjct 16421 GTCACTAGCGGCAAAAAACGC 16401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138537250040