Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04- 17] 79 sequences; 9,328,382 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq22 138 2e-27 seq66 86.0 9e-12 >seq22 Length=83673 Score = 138 bits (152), Expect = 2e-27 Identities = 231/332 (70%), Gaps = 4/332 (1%) Strand=Plus/Plus Query 125231 GTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290 |||||||||||||||||| || ||||| |||||| | ||||| ||||||||| | || Sbjct 16484 GTGCTTTTACGGATTCCAGATTATGATGGAGAACATTCACTCTGAAATGTACAGTCTGCT 16543 Query 125291 GATTGACATGTACATTCGCGATCCGCAACGTAAACACA--TGCTCTTTAACGCAATCGAC 125348 ||||||| ||| | || | | | || | || | || ||| | || || | Sbjct 16544 TATTGACACTTACGTCAAGGAAACTAA--GGAATCCCAGTTCCTTTTTGATGCCATTTTC 16601 Query 125349 ACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAG 125408 ||| | || | || | || ||||| | |||| |||| ||||| |||||| | Sbjct 16602 ACGATTCCTGCCATTCAGAAGAAGGCCAAGTGGGCTCTTCGCTGGATTACTGACGAGGAA 16661 Query 125409 TCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGT 125468 || | ||| || |||| || |||||||| || || ||||| | ||||| || || Sbjct 16662 GCTAGTTTCGCTGAGCGACTAGTCGCATTCGCAGCTGTTGAGGGTGTTTTCTTCTCAGGA 16721 Query 125469 AGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528 ||||| || || || |||||||| ||||| || || ||||| || |||| |||| Sbjct 16722 TCCTTTGCTGCTATTTTCTGGCTCAAAAAGCGTGGCCTTATGCCGGGTTTGACCTTCAGT 16781 Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACA 125560 |||||||| || ||||| |||||||| || || Sbjct 16782 AACGAGTTGATTTCTCGTGACGAGGGTCTTCA 16813 >seq66 Length=396251 Score = 86.0 bits (94), Expect = 9e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| ||||| ||||| ||| | || | || | ||||| ||||| | || Sbjct 307260 CAGGGTGGCAACAAACGTCCAGGTGCTTTCGCTATTTATCTTGAACCCTGGCATGATGAT 307201 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 ||||||||||| ||||| | || || ||| |||| ||||| | || ||| | || Sbjct 307200 GTTTTTGACTTCATCGATCTTCGTAAGAACACTGGTAAGGAAGAAGTCCGTGCCCGTGAT 307141 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA 97042 |||||| || || ||| | || || || ||||||||| | || || Sbjct 307140 CTGTTTTTGGCTCTTTGGATTCCTGACTTATTCATGAAGAGAGTTAA 307094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058468204040