Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq22 138 2e-27
seq66 86.0 9e-12
>seq22
Length=83673
Score = 138 bits (152), Expect = 2e-27
Identities = 231/332 (70%), Gaps = 4/332 (1%)
Strand=Plus/Plus
Query 125231 GTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290
|||||||||||||||||| || ||||| |||||| | ||||| ||||||||| | ||
Sbjct 16484 GTGCTTTTACGGATTCCAGATTATGATGGAGAACATTCACTCTGAAATGTACAGTCTGCT 16543
Query 125291 GATTGACATGTACATTCGCGATCCGCAACGTAAACACA--TGCTCTTTAACGCAATCGAC 125348
||||||| ||| | || | | | || | || | || ||| | || || |
Sbjct 16544 TATTGACACTTACGTCAAGGAAACTAA--GGAATCCCAGTTCCTTTTTGATGCCATTTTC 16601
Query 125349 ACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAG 125408
||| | || | || | || ||||| | |||| |||| ||||| |||||| |
Sbjct 16602 ACGATTCCTGCCATTCAGAAGAAGGCCAAGTGGGCTCTTCGCTGGATTACTGACGAGGAA 16661
Query 125409 TCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGT 125468
|| | ||| || |||| || |||||||| || || ||||| | ||||| || ||
Sbjct 16662 GCTAGTTTCGCTGAGCGACTAGTCGCATTCGCAGCTGTTGAGGGTGTTTTCTTCTCAGGA 16721
Query 125469 AGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528
||||| || || || |||||||| ||||| || || ||||| || |||| ||||
Sbjct 16722 TCCTTTGCTGCTATTTTCTGGCTCAAAAAGCGTGGCCTTATGCCGGGTTTGACCTTCAGT 16781
Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACA 125560
|||||||| || ||||| |||||||| || ||
Sbjct 16782 AACGAGTTGATTTCTCGTGACGAGGGTCTTCA 16813
>seq66
Length=396251
Score = 86.0 bits (94), Expect = 9e-12
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| ||||| ||||| ||| | || | || | ||||| ||||| | ||
Sbjct 307260 CAGGGTGGCAACAAACGTCCAGGTGCTTTCGCTATTTATCTTGAACCCTGGCATGATGAT 307201
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
||||||||||| ||||| | || || ||| |||| ||||| | || ||| | ||
Sbjct 307200 GTTTTTGACTTCATCGATCTTCGTAAGAACACTGGTAAGGAAGAAGTCCGTGCCCGTGAT 307141
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA 97042
|||||| || || ||| | || || || ||||||||| | || ||
Sbjct 307140 CTGTTTTTGGCTCTTTGGATTCCTGACTTATTCATGAAGAGAGTTAA 307094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058468204040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |